Pseudomonas cavernae: D3880_14915
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Entry
D3880_14915 CDS
T08208
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcav03009
]
D3880_14915
Enzymes [BR:
pcav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
D3880_14915
Ribosome biogenesis [BR:
pcav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D3880_14915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AYC33567
UniProt:
A0A385Z672
LinkDB
All DBs
Position
complement(3280985..3282271)
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AA seq
428 aa
AA seq
DB search
MSESEYSPSGEKLQKVLARIGLASRRDAEAWISEGRVKVNGVVAGLGQRVDLHDAITVDG
RLLKREEQRETVRRVLIYNKPDGEICTRDDPEGRPTVFDRLPKPKEGRWINIGRLDINTT
GLLLFTTDGELANRLMHPSYQMDREYAVRVRGEVDDEMIERLKTGVMLEDGPAKFTDIQQ
APGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLTSDLSMGRWREMG
QREIDILSAEVGLEAVELPAMKEKARDKLDRLQRKSAKPVGRAARPERTLRPGAGPRAEG
GRPARPQRDGAERPARAPRDGAERPVRAPRDGAERPVRAPRDGAEQRPSRNPKRGESAER
APRPAGKRGTPVAERPADVNKKRSGGGKAGRPAVELADRPARKPAPAKRRPPAAEGQRPG
FGRGRKPE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtccgaatacagccccagcggggaaaaactgcagaaagtcctggcccgcatc
ggcctcgcctcgcgtcgcgacgccgaagcctggatcagcgaaggccgggtcaaggtcaac
ggcgtggtcgccggcctgggccagcgcgtcgatctgcatgacgccatcaccgtcgatggc
cgcctgctcaagcgcgaggagcagcgcgagaccgtgcgccgcgtgctgatctacaacaag
cccgatggcgagatctgcacccgcgacgacccggaaggtcggccgaccgtgttcgatcgc
ctgccgaagccgaaggaagggcgctggatcaacatcggccgtctcgacatcaataccacc
ggtctgctgctgttcaccaccgacggcgaactggccaaccggctgatgcacccgtcctac
cagatggaccgcgagtacgccgtgcgcgtgcgcggcgaggtcgacgacgagatgatcgag
cgcctgaagaccggcgtgatgctcgaagacggtccggcgaaattcactgatatccagcaa
gcacccggcggcgaaggcttcaaccactggtatcactgcgtggtgatggaaggccgcaac
cgcgaagtgcgccgcctatgggagtcccagggtctggtggtgagccgcctgaagcgcgtg
cgcttcggtccggtgttcctcacctccgacctgagcatgggccgctggcgcgagatgggg
cagcgtgaaatcgacatcctcagcgccgaagtcggcctggaggcggtagagctgccggcg
atgaaggaaaaggcccgcgacaagctcgatcgtctacagcgcaaatcggccaagccggtc
ggtcgtgccgcgcgtccggagcgcaccttgcgccctggtgccggcccgcgtgccgaaggc
gggcgtccggcgcgtccgcagcgtgatggcgccgagcgtccggcgcgcgcaccgcgcgac
ggtgccgaacgtccggttcgtgcgccacgtgatggcgctgagcgtccggttcgcgcacca
cgtgacggcgccgagcagcgtccgtcacgtaatccaaagcgcggcgagtcggccgagcgc
gccccacgaccggccggcaagcgtggcacgccggtggctgagcggcctgctgacgtgaac
aagaaacgttcgggcggcggcaaggccgggcgtccggcggtggagctggccgatcgtccg
gcacgcaagccagcaccggccaagcgccggccgccggcggctgaagggcagcggccgggc
tttggccgtgggcgcaagccggaataa
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