Pseudomonas cavernae: D3880_16350
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Entry
D3880_16350 CDS
T08208
Name
(GenBank) beta-agarase
Organism
pcav
Pseudomonas cavernae
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Gene cluster
GFIT
Motif
Pfam:
Agarase_CBM
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
AYC33831
UniProt:
A0A385Z574
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All DBs
Position
complement(3582492..3584990)
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AA seq
832 aa
AA seq
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MIRRSLPAVFALAFATPLFAAAPEQQTLFNFVSPTDVVQVNTKNASLPQLTAETTPEGEI
LRRVTFNPGDHPSLRLTPQNGQWDWSQAGVMNLRIQSAMDWALTLLVTIESADGKQLTSR
IALPAGPAQNLLVPLQATSPLARGMRAAPPMPWNYQGKRTLLATSVAGELDRAKVVAVTL
ALEHPDVAQSILVGRFGVTAGNDAEQSVYAGIVDGYGQFSRGQWPEKVSSDAQLRAAASK
ERGQLQGWLQQRSQLDQFGGWLSGPQFEAKHFFRTEKRDGRWYLVTPEGHPFYSIGVNAV
STEHSATYIEGRESMFSALPKTEEPLAAYYGTSDSRRETGANKGRGFAQGRWFDFYRANL
QRGYADPACNAPAKPAIPAPTATSAATATAAPSAAQAPKAAPDCKGFDVERWAGHALDRL
QAWGFNTIGNWSEPALGAAKRVPYTIPLSISGDYATISTGLDWWGGMPDPFDPRFAMAAE
RNIAIATRDHRDDPWLLGYFADNELAWAGPGEGPQARYALAYGTLRLTTDVPAKRAFLKQ
LRDKYRNEEGLSKAWGIELKAWELMEDPGFQAPLPNPEHPAIEKDLQRFQRLFADTYFKT
IADSLQWNAPNHLLLGGRFASSTPEAVASCAQYCDVLSFNFYTREPQQGYDFAALRELDK
PVLVGEFHFGSRDRGPFWGGVQEVYKEEERGPAYAHFLKQALSEPSIVGVHWFQYLDQPV
TGRLLDGENGHFGLVGITDRPFQGFVEAARKANLGVGKTLLTAAKAPAAESSKPAEAAKP
AAQQPPAPAKAVEPGRAPEPAEPAKPVAPSPAPASPSEGQAPPAQADEPSKP
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgattcgccgttcactgcctgcggtttttgccctggccttcgccacgccactgtttgcc
gcggcgcccgaacagcagacgctgttcaacttcgtcagccccaccgatgtggtgcaggtg
aacacgaaaaatgccagcctgccgcagctgaccgcggaaaccaccccggaaggcgagatt
ctccgccgcgtgaccttcaaccccggcgaccatccaagcctgcgtctgaccccgcaaaac
ggccagtgggactggtcgcaggccggggtcatgaatctgcgcatccagagcgctatggac
tgggccttgaccctcctggtcaccatcgaaagtgccgacggcaagcaactgaccagtcgc
atcgccctgccagcggggccggcgcagaacctcctggtgcccctgcaggccacctcgccg
ttggcccgcggcatgcgcgcggctccgccgatgccgtggaactatcaaggcaagcgcacc
ctgctggccaccagcgtggcgggcgaactggatcgtgccaaggtggtggcggtgaccttg
gcactggaacatccggacgtggcccagagcatcctggtcggccgctttggcgtcaccgcg
ggcaacgacgccgagcagtccgtctatgccggcatcgtcgatggctatggccagttcagc
cgcggccagtggccggagaaggtcagcagcgacgcgcagttgcgtgccgccgcgagcaag
gagcggggtcagttgcaaggctggctgcagcagcgttcgcagctagaccaattcggcggc
tggctgagcggtccgcagttcgaggctaaacattttttccgcaccgagaagcgtgacggt
cgctggtatctggtcacacccgagggtcacccgttctattccatcggcgtcaatgcggtg
agcacggagcacagcgctacctacatcgagggtcgcgaaagcatgttcagcgccttgccc
aagaccgaggaaccgctggccgcctattacggcactagcgatagccggcgcgaaaccggc
gccaacaagggccggggcttcgcccagggccgttggttcgacttctaccgtgccaacctg
cagcgcggttacgccgatccggcctgcaatgccccggccaagccggccatcccagcgccg
acggctacatcggctgccaccgcgactgcggcgccgagcgcggcgcaagcgccgaaggcc
gcgccggactgcaagggcttcgatgtcgagcgctgggccggccatgccctggaccgccta
caggcctggggcttcaacaccatcggcaactggagcgaaccggctctgggcgccgccaag
cgcgtgccttacaccattccgctgtcgatcagcggcgactacgcgaccatcagcaccggc
ctggactggtggggcggcatgcccgatccgttcgatccgcgcttcgccatggccgccgaa
cgtaatatcgccatcgccacccgcgaccatcgcgacgatccctggctgctcggctacttc
gccgataatgagctggcctgggccggccccggcgaaggtccgcaggcgcgctatgcgctg
gcctacggcaccctgcgactgaccaccgatgtgccggccaagcgtgccttcctcaagcag
ttgcgcgacaagtaccgcaacgaggagggcctatcgaaggcctggggcatcgagctgaag
gcttgggagctgatggaggacccgggcttccaggcgccgctgccgaatcccgagcatccg
gccatcgaaaaagacctgcagcgcttccagcgcctgttcgccgatacctacttcaagacc
atcgccgactcgctgcagtggaacgcccccaatcacctgctgctcggcggccgtttcgcc
agttcgacgccggaggcggtggcttcctgcgcccagtattgcgatgtgctgagcttcaac
ttctacacccgcgagccgcagcagggctacgacttcgccgccctgcgcgagttggacaag
ccggtgctggtcggcgaattccacttcggctcgcgcgatcgcgggccgttctggggcggt
gtgcaggaggtatacaaggaggaggagcgtggtcccgcctatgcgcatttcctcaagcag
gcgctgagcgagccgagcatcgtcggcgtgcactggttccaatacctcgaccagccggtg
accggtcgcttgctggatggcgagaacggccacttcggcctggtcggcatcaccgaccgg
ccgttccagggcttcgtcgaggcggcacgcaaggccaacctcggcgtcggcaaaaccctg
ctgacggccgccaaggcgccggccgctgagtccagcaagcccgccgaagcagccaagccg
gctgcccagcaaccgccggcgcccgccaaagcggtcgagccgggcagggcgccggagcct
gccgaaccggccaagcccgtggcaccgtcgcccgcgcctgcttccccaagtgaagggcag
gcgccgcctgcccaggctgacgaacccagcaagccataa
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