Pseudomonas cavernae: D3880_16420
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Entry
D3880_16420 CDS
T08208
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00450
Selenocompound metabolism
pcav00970
Aminoacyl-tRNA biosynthesis
pcav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
D3880_16420
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D3880_16420
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcav01007
]
D3880_16420
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcav03016
]
D3880_16420
Enzymes [BR:
pcav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
D3880_16420
Amino acid related enzymes [BR:
pcav01007
]
Aminoacyl-tRNA synthetase
Class I (U)
D3880_16420
Transfer RNA biogenesis [BR:
pcav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
D3880_16420
Prokaryotic type
Other AARSs
D3880_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
AYC35117
UniProt:
A0A385Z9W6
LinkDB
All DBs
Position
3597679..3599721
Genome browser
AA seq
680 aa
AA seq
DB search
MSEARKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKLRGNQCVYVCADDAHGSAIML
RAEKEGISAEQLIANVKAEHTADFADFLVDFDNYHSTHAEENRELSSAIYLKLRDAGHIA
TRAVTQYFDPEKGMFLADRFIKGTCPKCAAEDQYGDNCEKCGATYEPTELKNPRSAISGA
VPVLKESKHFFFKLPDFEAMLKSWTRSGTLQDAVANKIAEWLDGGLQEWDISRDAPYFGF
EIPDEPGKYFYVWLDAPIGYMASFKNLCAKRPELDFDAFWAKDSTAELYHFIGKDIVNFH
ALFWPAMLEGAGFRKPSGVNVHGYLTVNGQKMSKSRGTFIKARTYLDHLNPEYLRYYYAA
KLGRGVDDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVLVAGNAAPELTEAF
QAAAPSIAEAYEARDFSRAMREVMALADRANAWIADKAPWVLAKQDGKQAEVQAVCALGV
NLFRQLVILLKPVLPNLASAAEAFLNVAPLTWDDHQSLLANHQLNPFNPLLTRIEPAKIE
AMIEASKEDLAATEASNPPQGNGELSKEPLAAEIAFDTFAAVDLRIALIEKAEFVEGADK
LLRLTLDIGDAKRNVFSGIKSAYPDPSKLEGRLTLYVANLAARKMKFGVSEGMVLAAGPG
GEDIYLLSPDNGAKPGQRVK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagcccgcaagattctcgtcaccagcgccctgccctatgccaacggttcgatc
cacctcggccacatgctcgagtacatccagaccgacatgtgggtgcgtttccagaagctg
cgcggcaaccagtgcgtgtatgtgtgcgccgacgacgcccacggttcggcgatcatgctg
cgggccgagaaggaaggcatcagcgccgaacagttgatcgccaacgtcaaagccgagcac
accgccgacttcgccgacttcctggtcgacttcgacaactaccactccacccacgcggaa
gagaaccgcgagctgtcgagcgccatctacctgaagctgcgcgacgccgggcacattgcc
acccgcgcggtgacccagtacttcgacccggaaaagggcatgttcctcgccgaccgtttc
atcaagggcacctgcccgaaatgcgcggccgaggaccagtacggcgacaactgcgagaaa
tgcggcgccacctacgagccgaccgagttgaagaacccgcgctcggccatctccggcgcc
gtgccggtgctcaaggagtccaagcatttcttcttcaagctgccggacttcgaggccatg
ctgaaaagctggacgcgcagcggcaccctgcaagacgcggtagccaacaagatcgccgaa
tggctggatggcggcctgcaagagtgggacatcagccgcgatgcgccgtacttcggcttc
gagattcccgacgaaccgggcaagtacttctacgtctggctggacgcgccaatcggctac
atggccagtttcaagaacctctgcgccaagcgcccggagctggacttcgatgccttctgg
gccaaggactcgacggccgagctgtaccacttcatcggcaaggacatcgtcaacttccac
gccctgttctggccggcgatgctcgaaggcgccggtttccgcaagccgagcggcgtcaac
gtgcacggctacctcacggtcaacggccagaagatgtccaaatcacgcggcaccttcatc
aaggcacgcacctatctggatcacctgaatccggaatacctgcgctactactacgccgcc
aagctcggccgtggcgtcgacgacctcgacctcaacctcgaagacttcgtgcagaaggtc
aactccgacctggtcggcaaggtggtcaacatcgccagccgctgcgccggcttcatccac
aagggcaacgccggcgtgctggtcgccggcaacgccgcgccggaactgaccgaggccttc
caggccgccgcgccgagcatcgccgaggcctacgaggcccgcgatttctcccgcgccatg
cgcgaggtcatggcgctggccgaccgcgccaatgcctggatcgccgacaaggcgccctgg
gtcctggccaagcaggacggcaagcaggctgaagtgcaggccgtgtgcgccctgggcgtg
aacctgttccgccaactggtgatcctcctcaagccggtgctgccgaatctggccagcgcc
gccgaggccttcctgaatgtcgcgccgctgacttgggacgaccaccagagcctgctggcc
aaccaccagctgaatccgttcaatccgctgctgacccgtatcgagcccgcgaaaatcgaa
gccatgatcgaagcctccaaggaagacctcgccgccaccgaagccagcaacccgccgcaa
ggcaacggagaactgagcaaggagccgctggccgcggaaatcgcctttgacaccttcgcc
gcggtcgacctgcgcatcgccctgatcgagaaagccgagttcgtcgaaggcgccgacaag
ctgctgcgcctgaccctggatatcggcgacgccaaacgcaacgtgttctccgggatcaag
agcgcctacccggacccgagcaaactggaaggccgcttgaccctgtacgtggccaacctg
gccgcgcgcaagatgaagttcggcgtctccgaaggcatggtcctggccgccggccccggc
ggcgaagacatctacctgctcagcccggacaacggcgccaagcccggccagcgggtcaag
taa
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