Pseudomonas cavernae: D3880_16560
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Entry
D3880_16560 CDS
T08208
Name
(GenBank) DeoR family transcriptional regulator
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcav03000
]
D3880_16560
Transcription factors [BR:
pcav03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
D3880_16560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
MarR
MarR_2
HTH_20
HTH_Crp_2
Put_DNA-bind_N
HTH_28
HTH_24
HTH_36
LexA_DNA_bind
FeoC
Rrf2
HTH_29
Fe_dep_repress
AbiEi_4
CoA_trans
Cullin_Nedd8
HTH_IclR
MerR
PqqD
RuvB_C
Motif
Other DBs
NCBI-ProteinID:
AYC33870
UniProt:
A0A385Z5S5
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All DBs
Position
3624814..3625572
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AA seq
252 aa
AA seq
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MNLAPRQQSILDRARERGYVSIDELAQAFAVTPQTIRRDINQLAERGLLRRTHGGAASEA
SSIHNTAYAMRAGQMREEKQRIAEAIATQIPDHASLFISIGTTTEAIARALLNHRGLKVI
TNNLHVAAQLSAQADFEVLVAGGTVRSDGGVVGQAAVDFIQQFKVDFALVGISGIDEDGS
LLDFDYQEVRVSQAIIHNARQVLLAADSSKFGRNAVVRLGSIALVHQLFTDSPPPTAIAR
LLAEQKIQLHLV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgccccgacagcagagcatcctcgaccgcgcccgcgagcgcggctacgtc
agcatcgacgagctggcccaggccttcgccgtcaccccgcagaccatccgccgcgacatc
aaccagctggccgagcgcggcctgctgcggcgcacccacggtggcgccgccagcgaggcc
tcgagcatccacaacaccgcctacgccatgcgcgccgggcagatgcgcgaggagaaacag
cgcatcgccgaggccatcgccacgcagattcccgaccacgcctcgctgttcatcagcatc
ggtaccaccaccgaggcgatcgcccgcgccctgctcaaccatcgcggcctgaaggtgatc
accaacaacctgcacgtcgctgcccagctcagcgcccaggccgatttcgaggtgctggtg
gccggcggcacggtgcgcagcgatggcggcgtggtcggccaggcggcggtggatttcatc
cagcaattcaaggtcgacttcgccctggtgggcatcagcggcatcgacgaagacggcagc
ctgctcgacttcgactaccaggaagtgcgcgtgtcccaggcgatcatccacaacgcacgg
caggtgctgctggccgccgactcgagcaaattcggccgcaacgccgtggtgcgcctgggc
tccatcgccctggtccaccagttgttcaccgacagtccaccacccaccgccatcgcccgt
ctgctggccgagcagaagatccagctgcatctggtctga
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