Pseudomonas cavernae: D3880_16615
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Entry
D3880_16615 CDS
T08208
Name
(GenBank) LysR family transcriptional regulator
KO
K03576
LysR family transcriptional regulator, regulator for metE and metH
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcav03000
]
D3880_16615
Transcription factors [BR:
pcav03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D3880_16615
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_20
MarR_2
HTH_5
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AYC33881
UniProt:
A0A385Z5C4
LinkDB
All DBs
Position
3640780..3641700
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AA seq
306 aa
AA seq
DB search
MLEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGMPLFVRKTKPVRFSS
AGLRLLQLADSLLPQLRAAERDMARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDSWPE
VELDLASGFSFAPLPALARGDLDLVVTSDPVELPGITYVPLFTYEALLAVANQHPLASKP
YIQPEDLAGETLITYPVERDRLDIFTRFLEPADVEPAQVRTAELTVMMMQLVASGRGVCG
LPNWAMHEYSARGYVTAKKLGSKGLYATLYAAIRADMLDAPFMRDFLLTAKDTSFATLEG
VSAARG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaatccgccacctgaaaaccctgcatgccctgcgcgaggccgacagcctggtg
gaagccgccgagcgtctgcacctgacccagtcggcgctctcgcaccagttcaaggaactg
gaagaacgcctgggcatgccgctgttcgtgcgcaagaccaagccggtgcgtttcagcagc
gccggcctgcgcctgctgcagctggccgacagcctgctgccacagttgcgcgccgccgag
cgcgacatggcgcgcctggccggcggcacggcaggtaggctgcacatggccatcgaatgc
cacagctgcttccagtggctgatgccgaccatcgaccagtttcgcgactcctggccggaa
gtcgagctggatctcgcctcgggcttctccttcgccccgctgccggccctggcgcgcggc
gacctcgacctggtggtgacctccgaccccgtcgagctgcccggcatcacctacgtgccg
ctgttcacctacgaggcgctgctcgccgtggccaaccagcacccgctggcgagcaagccg
tatatccagccggaggacctggccggcgagacgctgatcacctacccggtggagcgcgac
cgcctggacatcttcacccgcttcctcgaaccggccgacgtcgaaccggcgcaggtgcgc
accgctgagctgacggtgatgatgatgcagctggtggccagcggccgcggcgtctgcggc
ctgcctaactgggccatgcacgagtacagcgcgcgcggctacgtgacggccaagaaactc
ggcagcaagggcctgtacgccaccctctacgcggcgatccgcgccgacatgctggatgcg
ccgttcatgcgcgacttcctgctgactgccaaggacacttcgttcgccaccctggaaggg
gtcagtgcggcgcgaggctga
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