KEGG   Pseudomonas cavernae: D3880_16875
Entry
D3880_16875       CDS       T08208                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
pcav  Pseudomonas cavernae
Pathway
pcav03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    D3880_16875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcav03400]
    D3880_16875
Enzymes [BR:pcav01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     D3880_16875
DNA repair and recombination proteins [BR:pcav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     D3880_16875
 Prokaryotic type
     D3880_16875
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AYC33931
UniProt: A0A385Z5H5
LinkDB
Position
complement(3694224..3694919)
AA seq 231 aa
MSADERIKLEAGWKEALREEFDKPYMHELRAFLLNERQAGKTVFPPGPLIFNALNSTPLG
QVKVVIIGQDPYHGPGQAHGLCFSVQPGVPVPPSLQNIYKELKRDLNIDPPTHGCLQHWA
EQGVLLLNTSLTVEQACAGSHAKAGWQFFTDRVIEVVSSHQPRLVFLLWGAHAQSKERLI
DPTKHLILRSPHPSPLSAHRGFIGNGHFGRTNKFLAQYGLQPIDWRLPAQP
NT seq 696 nt   +upstreamnt  +downstreamnt
atgagcgccgacgaacgcatcaagctcgaagcgggctggaaagaagccctgcgcgaggaa
ttcgacaagccctacatgcacgagctgcgggcgttcctgctgaacgagaggcaggccggc
aaaacagtcttcccgccggggccgctgatcttcaatgcgctgaattcgacgccgctgggc
caggtcaaggtggtcatcatcggccaggacccctatcacggcccgggtcaggcgcatggc
ctgtgcttctcggtgcagcccggcgtgccggtgccgccgtccttgcagaacatctacaag
gagctcaagcgcgacctgaatatcgacccgcctacgcatggctgcctgcagcactgggcc
gagcagggcgtgttgctgctcaacacctcgttgaccgtcgagcaggcgtgcgcgggctcg
catgccaaagccggctggcagtttttcaccgaccgggtgatcgaggtggtcagcagccac
cagccgcgcctggtcttcctgctctggggtgcccatgcgcagagcaaggagcgcctgatc
gacccgaccaagcacctgattctgcgctcgccgcatccgtcgccgctgtccgcgcaccgc
ggctttattggcaacggccacttcggccggaccaataagttcctcgcccaatacggcttg
cagccgatcgactggcgtctgcccgctcagccctga

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