Pseudomonas cavernae: D3880_17820
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Entry
D3880_17820 CDS
T08208
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcav03400
]
D3880_17820
DNA repair and recombination proteins [BR:
pcav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
D3880_17820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_16
SLFN-g3_helicase
ResIII
T2SSE
AAA_10
TrwB_AAD_bind
AAA_30
AAA_7
CbiA
SRP54
AAA_19
AAA_6
Motif
Other DBs
NCBI-ProteinID:
AYC34103
UniProt:
A0A385Z801
LinkDB
All DBs
Position
complement(3927557..3929044)
Genome browser
AA seq
495 aa
AA seq
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MSASNSFILGADPAGQPVAQSLRLANRHGLVAGATGTGKTVTLQRLAETFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKVAERVAAMPWLNYQAKAYPVTLWDIQGQSGHPLRTTLSEMGP
LLLSNLLELTDSQQAALYAAFQVADREGLLLLDLKDLKALLNHLKDHPEVLGEDRALFTG
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPAADGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFSGTPKALQERLEQVVRLIRSKGVG
VYFITQSPGDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFNALDVLTEL
GIGEALVGTLEEKGTPAMVQRVAIAPPQSRIGALSAGEREALIRQSPLAGRYDKPIDRES
AYERLTNRTVASRELDVPVKPAEKGVDSGLGGMAGELLGSLASQAMKTAVRQAANQLGRQ
LVRGLMGSLLGGKRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtctaattccttcattctcggtgccgatcctgcgggtcagccggttgcgcag
tcgctgcgcctggccaaccgccacggcctggtggccggcgccaccggcacgggcaagacc
gtgactctgcagcgtctggcggaaacctttagcgacgccggggtggcggtattcgccgcc
gatatcaagggcgatctctgcggcctcggcgcggccggcaatccgcagggcaaggtggcc
gagcgggtggcggccatgccctggctgaattatcaggccaaggcttatccggtgaccctg
tgggacatccagggacaaagcggccatccgctgcgcaccacgctcagcgagatggggccg
ctgctgctgagcaacctgctggaactcaccgacagccagcaggccgcgctctacgccgcg
ttccaggtcgccgatcgcgagggcctgttgttgctcgacctgaaggacctcaaggcgctg
ctcaatcacctcaaggatcatcccgaagtgctcggcgaagaccgcgcgctgttcaccggc
ggttccagccaggcgctgttgcgccgcctggccaccctcgagcaacaaggcgccgaggcg
ctgttcggcgagccggcgctgcagttggaggacatcctgcagccggcggccgatggccgc
gggcgtatccatctgctcgacgccagccgcctggtgcacgaggcgccgaaggtctacgcg
accttcctgctgtggctgctggccgagttgttcgagcagttgccggagcgcggcgatgcc
gacaagccggtgctggcgctgttcttcgacgaggcccatctgctcttcagcggcaccccg
aaagcgctgcaggagcgtctggagcaggtggtgcggctgattcgctcgaaaggcgtgggg
gtgtatttcatcacccagtcgccgggcgacctgcccgatgacgtgttggcccagctcggc
ctgcgcatccagcatggcttgcgtgcgttcaccgccaaggagcagaagtccctgcgcgcg
gtggccgatggtttccgccccaacccggccttcaatgctctcgatgtgctcaccgagctg
ggcataggcgaggcgttggtcggtaccctggaggagaagggcacgccggccatggtgcag
cgggtggccatcgcgccgccgcagtcgcgcatcggcgcgctctcggcgggcgagcgtgag
gcgctgatccgccagtcgccgttggctgggcgttacgacaagcctatcgaccgcgagtcg
gcctacgaacgcttgaccaaccgcaccgtggcgagtcgggaactggacgtgccggtcaaa
ccggcggagaagggggtggacagcgggctgggcggcatggccggtgagctgctcggcagc
ctggccagtcaggccatgaagacggcggtgcggcaggcggccaatcaactgggccggcaa
ctggtgcgtggcctgatgggctcgctgctgggtggcaagcggcgctaa
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