Pseudomonas cavernae: D3880_18935
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Entry
D3880_18935 CDS
T08208
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pcav03110
]
D3880_18935 (clpB)
Chaperones and folding catalysts [BR:
pcav03110
]
Heat shock proteins
HSP100
D3880_18935 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
TniB
nSTAND3
ATPase_2
AAA_24
DUF815
AAA_14
IstB_IS21
Mg_chelatase
AAA_7
bpMoxR
AAA_18
NBD_SMAX1
ABC_tran
DNA_pol3_delta2
AAA_19
NACHT
AAA_25
ATP_bind_1
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
AYC34312
UniProt:
A0A385Z9H3
LinkDB
All DBs
Position
complement(4158878..4161442)
Genome browser
AA seq
854 aa
AA seq
DB search
MRIDRLTSKLQLALSDAQSIAVGLDHPAIEPLHLMQALLEQQGGSIKPLLMQVGFDIPGL
RQALNKELDHLPKIQNPTGDVNLSQDLARLLNQADRLSQQKGDQFISSELVLLAALDENT
RLGKLLLAQGVSKKALENAVANLRGGDAVNDPNAEEARQALDKYTVDLTKRAEDGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLSL
DMGALIAGAKFRGEFEERLKAVLNDLSKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVH
HGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLVDEAGSRIRMEIDSKPEALDRLERRLI
QLKIEREALKKEDDEATKKRLAKLQDDIAKLEKEYADLEEVWKSEKAEVQGSAQIQQKIE
QAKQELENARRKSDLQRMAELQYGIIPDLERSLQMVDQHGKTEKQLLRNKVTDEEIAEVV
SKWTGIPVAKMLEGEREKLLKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGS
FLFLGPTGVGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG
YLTEAVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNL
GSVQIQELVGDREAQRAAVMDAVSAHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRL
RQRLSERELSLALSGEALDKLVAVGYDPVYGARPLKRAIQRWIENPLAQQILAGEFAPGA
SITAKVEGGEIVFV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatagaccgtttgaccagcaagctgcaactggccctgtccgacgcccaatccatc
gccgtcggcctcgatcatccggcgatcgaacccttgcacctgatgcaggccctgctggaa
cagcagggcggctcgatcaagccgctgctgatgcaggtgggcttcgatattcccggcctg
cgccaggcgctgaacaaagagctcgatcacctgccaaaaatccagaaccccaccggcgac
gtcaatctttcgcaggatctggcccgtctgctcaaccaggccgatcgcctgtcgcagcag
aagggcgaccagttcatctccagcgaactggtgctgctcgccgccctggacgagaacacc
cgcctgggcaagctgctgctcgcccagggcgtgagcaagaaggccctggaaaacgcggtg
gccaacctgcgcggcggcgatgccgtgaacgacccgaatgccgaggaggcgcgccaggcg
ctggacaaatacaccgtcgacctgaccaagcgtgccgaagacggcaagctcgacccggtg
atcggccgtgacgacgaaatccggcgcaccatccaggtcctgcagcggcggaccaagaac
aacccggtgctgatcggcgagcccggcgtcggcaagaccgccatcgtcgagggcctggcc
cagcgcatcgtcaacggcgaagtgccggacggcctcaaggacaagcgcctgttgtctttg
gatatgggcgcgctgatcgccggcgccaaattccgcggcgagttcgaggagcgtctgaag
gcggtgctcaacgacctgtccaagcaggaagggcggatcatcctgttcatcgacgaactg
cataccatggtcggcgccggcaaggccgagggcgccatggatgccggcaacatgctcaag
ccggcgctggcgcgtggcgagctgcactgcgtcggcgccaccacgctggacgaatatcgc
cagtacatcgagaaggatgcggcgctggagcggcgcttccagaaggtgctggtcgatgag
ccgagcgaagaagacaccatcgccatcctccgtggcctcaaggagcgctacgaggtgcat
cacggcgtcaccatcaccgacggcgcgatcatcgccgcggccaagctcagccaccgctat
atcaccgaccgccagctgccggacaaggccatcgatctggttgacgaggccggtagccgc
atccgcatggaaatcgactccaagccggaagcgctggatcgcctggagcgccgcctgatc
cagctgaagatcgagcgtgaggcgctgaagaaggaagacgacgaggccaccaagaagcgc
ctggccaagctgcaagacgacatcgccaagctggagaaggaatacgccgacctcgaggag
gtctggaagtcggagaaggccgaagtgcaaggttcggcgcagatccagcagaagatcgag
caggccaagcaggagctggaaaacgcccggcgcaagtcagatttgcagcgcatggccgaa
ctgcagtacggcatcattcccgacctcgagcgcagcctgcagatggtcgatcagcacggc
aagaccgagaagcagttgctgcgcaacaaggtcaccgacgaggagatcgccgaggtggtg
tcgaagtggaccggcatcccggtggccaagatgctcgagggcgagcgcgagaaactgctg
aagatggaaagcctgctgcatcagcgggtcatcggccaggacgaggcggtagtggcggtg
gccaacgccgtgcgccgctcgcgcgccggcttgtccgaccccaatcggccgagcggttcg
ttcctgttcctcggtcctaccggggtgggcaagaccgagctgtgcaaggcgctggcggaa
ttcctcttcgacaccgaagaggcgctggtgcgcatcgatatgtccgaattcatggagaag
cattccgtggcgcggctgatcggtgcgccgccgggctatgtcggctatgaggagggcggc
tacctgaccgaggcggtgcgccgtaagccttactcggtggtgctgctggacgaggtcgaa
aaggcccatccggatgtgttcaacatcctcctgcaagtgctcgaggacggtcgtctgacc
gacagccacgggcgcaccgtggacttccgcaacaccgtggtggtgatgacctcgaacctc
ggctcggtgcagatccaggagctggtcggcgaccgcgaggcgcagcgcgccgcggtgatg
gatgcggtgagcgcgcacttccggccggagttcatcaaccgcatcgacgaggtggtggtg
ttcgagccgctgggccgcgagcagatcgccggcatcgccgagatccagctgcagcgtctg
cgtcagcgcctgagcgagcgcgagctgagcctggcgctgagtggcgaggccctggacaag
ctggtcgccgtcggttacgacccggtctacggcgcgcggccgctgaagcgggcgatccag
cgctggatcgagaacccgctggcgcagcagatcctggccggcgagttcgctccgggcgcc
agcatcacggccaaggtagagggcggggagatcgtcttcgtctga
DBGET
integrated database retrieval system