Pseudomonas cavernae: D3880_18975
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Entry
D3880_18975 CDS
T08208
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pcav
Pseudomonas cavernae
Pathway
pcav02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3880_18975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcav02022
]
D3880_18975
02035 Bacterial motility proteins [BR:
pcav02035
]
D3880_18975
Two-component system [BR:
pcav02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
D3880_18975
Bacterial motility proteins [BR:
pcav02035
]
Pilus system
Twitching motility proteins
D3880_18975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_50
AAA_19
AAA_5
HTH_30
Pre_tape_measure
VpsR
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AYC34318
UniProt:
A0A385Z9D3
LinkDB
All DBs
Position
4168147..4169487
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AA seq
446 aa
AA seq
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MANRQRALIVDDEPDIRELLEITLGRMRLDTRSARNVKEAREWLTREPFDLCLTDMRLPD
GSGLELVQHIQQRHPQVPVAMITAYGNLDTAINALKAGAFDFLTKPVDLTRLRELVATAL
RLRTPQEEELPVDSRLLGDSPPMRALRKQILKLARSQAPVYISGESGSGKELVARLIHEQ
GPRSELPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQVANGGTLFLDEVADL
PLPMQVKLLRAIQEKAVRTVGGQQEQVVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVI
ELRVPPLRERREDIGLLADVMLKRLAESSGLPAAQLNPDALEKLKSYRFPGNVRELENML
ERAYTLCDDEQIQTHDLRLAESSGLAEAGEASLAQIDNLEDYLENLERKLIMQALEETRW
NRTAAAQRLGLTFRSMRYRLKKLGID
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgacaacgcgccctgatcgtcgatgacgagcccgatatccgcgaattgctg
gaaatcaccctcggccgcatgcgcctcgacacgcgcagcgcgcgcaacgtcaaggaagcc
cgcgagtggctgacgcgcgaacccttcgacctgtgcctgaccgacatgcgcctgcccgac
ggcagcggcctggagctggtgcagcacatccagcagcgccatccccaggtgccggtggcg
atgatcaccgcctatggcaacctcgacaccgcgatcaacgcgctcaaggccggcgccttc
gacttcctgaccaagccggtcgacctcacccgcctgcgcgaactggtggctaccgccctg
cgcctgcgcaccccgcaagaagaggagctgccggtggacagccgcctgctcggcgactcg
ccgcccatgcgcgcgctgcgcaagcagatcctcaagctcgcccgcagccaggcgccggtg
tatatcagcggcgaatcgggcagtggcaaggaactggtggcgcgcctgatccacgagcaa
ggtccgcgcagcgagctgccattcgtcccggtgaactgtggcgccatcccgtccgagctg
atggaaagcgagttcttcggccacaagaaaggcagcttcaccggcgccatcgaggacaag
caggggctgttccaggtcgccaacggcggcaccctgttcctcgacgaagtcgccgacctg
ccgctgccgatgcaggtcaaactgctgcgcgccatccaggaaaaggccgtgcgcacggtc
ggcggccagcaggagcaggtggtggacgtgcgcatcctctgcgccacccacaaggatctg
gccgccgaggtcgccgccggccgcttccgccaggacctctactaccgcctcaacgtcatc
gagctgcgggtgccgccgctgcgcgaacgccgcgaagacatcggcctgctcgccgacgtg
atgctcaagcgcctggccgaaagcagcggcctgcccgccgcccaactcaaccccgatgcg
ctggagaaactgaagagctatcgcttccccggcaacgtgcgcgagctggaaaacatgctc
gaacgcgcctacaccctgtgcgacgatgagcagatccagacccacgacctgcgcctggcc
gagtcatccggattagcggaagctggcgaggccagcctggcacagatagacaacctcgag
gactacctggaaaacctcgaacgcaaattgatcatgcaggcgctggaggaaacccgctgg
aaccgcaccgccgcagcccagcgcctgggcctgaccttccgctcgatgcgttatcggctg
aagaagctggggatcgattga
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