Pseudomonas cavernae: D3880_19385
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Entry
D3880_19385 CDS
T08208
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcav03009
]
D3880_19385
Enzymes [BR:
pcav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
D3880_19385
Ribosome biogenesis [BR:
pcav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D3880_19385
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AYC34396
UniProt:
A0A385Z5G7
LinkDB
All DBs
Position
complement(4255286..4255927)
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AA seq
213 aa
AA seq
DB search
MPRPPRPASRSSRPAPRAQPAPRRVAKAPPAEPRLILFNKPFDVLTQFSDEQGRATLKDF
IAIPGIYPAGRLDRDSEGLLLLTNDGRLQARIADPKHKLAKTYWVQVEGEPDETQLQRLR
DGVELNDGPTLPAQARRIEAPELWARNPPVRFRQSIPTSWLELVIREGRNRQVRRMTAAV
GLPTLRLVRVRIGPWSLDGLGLGEWKEVAARLD
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtcctccacgtcccgcttcccgctcctcccggccggccccacgcgctcagccg
gcgccccggcgggtggccaaggcgccgccggccgagccgcggttgatccttttcaacaag
ccgttcgacgtgctcacccagttcagcgacgagcaggggcgggcgacgctcaaggatttc
atcgcgatccccggcatctacccggccgggcgcctggatcgcgacagcgaaggcctgctg
ctgctgaccaacgacggccgcctgcaggcgcgcatcgccgaccccaagcacaagctggcg
aagacctattgggtgcaggtggaaggcgagccggacgagacgcagctgcagcgcctgcgc
gacggcgtcgagctcaacgacggcccgaccctgccggcgcaggcgcggcggatcgaggcg
cccgagctgtgggcgcgcaacccgccggtacgcttccgccagagcattccgaccagctgg
ctggagctggtgatccgcgaggggcgcaatcgccaggtgcggcggatgaccgcggcggtc
ggcctgccgaccctgcgcctggtacgcgtgcgcatcggcccctggagcctggatggcctg
gggctgggcgaatggaaggaagtcgcggcgcggctcgactga
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