Pseudomonas cavernae: D3880_19535
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Entry
D3880_19535 CDS
T08208
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00550
Peptidoglycan biosynthesis
pcav01100
Metabolic pathways
pcav01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D3880_19535 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3880_19535 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcav01011
]
D3880_19535 (mrdA)
Enzymes [BR:
pcav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D3880_19535 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcav01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
D3880_19535 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AYC34426
UniProt:
A0A385Z5J3
LinkDB
All DBs
Position
complement(4288192..4290090)
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AA seq
632 aa
AA seq
DB search
MPQPIHLKDHEKDARLVRARVIVGAIAVGLLTVVLIARQYYLQVIQYEYHSTLSENNRVH
VQPIPPTRGLIFDRNGVVIADNRPSFSLSVTRERAGDWRQVLDVIVEVLQLPPEDRALFE
KRMKQGRRPFEPVPILFELSEEQIARVAVNQFRLPGVEVVAQLVRHYPQGEHFAHSVGYV
GRINEAELKVLDPVNYSGTHHIGKTGIERFYEDQLHGKVGYEEVETNARGRVLRVLKRTD
PIPGDDLVLGLDVQLQGAAEQALGGRRGAVVALDPNSGEVLAMVSQPSFDPNLFVTGISF
KAYSGLRDSIDRPLFNRVLRGLYPPGSTVKPMVAISGLDAGVVTPASRVFDPGFYQLPNY
EHKYRNWNRTGDGWVNLEMAIMRSNDTYFYDLAHKMGIDRLHSYMSRFGFGQRVSLDMFE
ESAGLMPSRDWKRGRYRQPWFPGETLILGIGQGYMQATPLQLAQATALVANHGKWIRPHL
AKTIEGQPPVDPNPLPDIILHDPKFWDYGRNGMEQVMHGARGTARKVGDSAVYRIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFIGFAPADNPKIAVAVMVENGESGSGVAAPVVK
QVMDAWLLGTDGQLKPEYRLPQPDADNMSASR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgattcacctcaaagaccacgagaaagacgcccgtctggtgcgcgcgcgg
gtgatcgtcggcgccatcgccgtgggcctgctgacggtcgtgctgatcgcccgccagtac
tacctgcaggtgatccagtacgagtaccactcgacactgtcggagaacaaccgcgtccat
gtccagccgattccgccgacccgcgggctgatcttcgaccgcaacggcgtggtgattgcc
gacaaccgcccgagcttcagcctcagcgtcacccgcgagcgcgccggcgactggcgccag
gtgctcgatgtgatagtcgaagtgctgcagctgcccccggaggatcgcgcgctgttcgag
aagcgcatgaagcaggggcggcggccgttcgagccggtgccgatcctgttcgagctgtcc
gaggagcagatcgcccgcgtcgcggtcaatcagttccgcctgccgggggtcgaggtggtc
gcccaattggtgcgccattacccgcagggcgagcacttcgcccactcggtcggctatgtc
gggcggatcaacgaagcggagctcaaggtcctcgatccggtcaactacagcggcacccac
catatcggcaagaccggtatcgagcgcttctacgaggaccagttgcacggcaaggtcggt
tacgaggaagtggaaaccaacgcccgcggccgcgtgctgcgggtgctcaagcgcaccgac
ccgattcccggcgacgacctggtcctgggcctcgacgtccagctgcagggggccgccgaa
caggccctcggcggccgccgcggcgcggtggtggcgctcgatccgaacagcggcgaagtg
ctggcgatggtcagccagccgagcttcgaccccaatctgttcgtcaccggcatcagcttc
aaggcctattccgggttgcgcgattccatcgaccggccactgttcaaccgggtgttgcgc
ggtctttacccgccgggctcgacggtcaagccgatggtggcgatctccggcctggatgcc
ggggtggtgaccccggcctcgcgggtgttcgatccgggcttctatcagctgcccaattac
gagcacaagtaccgcaactggaaccgcaccggcgatggctgggtgaatctggaaatggcc
atcatgcgttccaacgacacctacttttacgacctcgcgcacaagatgggcatcgaccgc
ctgcatagctacatgagccgtttcggcttcggccagcgggtgtcgctggacatgttcgag
gaatccgccggcttgatgccgtcgcgcgactggaagcgcggccgctatcgccagccctgg
ttccccggcgagacgctgattctcggtatcggccagggctacatgcaggccacgccgctg
cagctggcgcaggccaccgcgctggtggccaaccacggcaagtggattcgcccgcacctg
gccaagaccatcgaaggccagccgccggtcgaccccaatccgctgccggacatcatcctg
catgatccgaaattctgggattacggccgcaacggcatggaacaggtgatgcacggcgcc
cgcggcaccgcgcgcaaggtcggcgactcggcggtctaccggatcgccggcaagagcggt
accgcacaggtggtggcgatcaagcagggcgagaagtacgaccgctccaaggtgcaggaa
cgccatcgcgaccatgcgctgttcatcggcttcgcgccggcggacaacccgaaaatcgcc
gtcgcggtgatggtcgagaacggcgagtccggctccggggtcgccgcgccggtggtcaag
caggtgatggacgcctggctgctcggcacggacggccagctgaaacccgaataccgcctg
ccgcagccggacgccgacaatatgagtgccagccgatga
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