Pseudomonas cavernae: D3880_19765
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Entry
D3880_19765 CDS
T08208
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00450
Selenocompound metabolism
pcav00970
Aminoacyl-tRNA biosynthesis
pcav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
D3880_19765
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D3880_19765
Enzymes [BR:
pcav01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
D3880_19765
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Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AYC34469
UniProt:
A0A385Z579
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Position
complement(4336539..4337945)
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AA seq
468 aa
AA seq
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MTALRLPSVDRLLRSPACTPLQQRYGRDALLKTLRDLLDELREPARHGQLAAAELSDAVL
AGRAGERLAAWHASKVRRVFNLTGTVLHTNLGRALLPEEAIEAICLAARYPLNLEFDLAS
GKRGDRDDLITGLICELTGAEAVTVVNNNAAAVLLALNSLGARKQGIISRGELIEIGGAF
RIPDIMARAGVKLVEVGTTNRTHARDYEAAINSRSGLLMRVHTSNYSVQGFTTRVPTFEL
AAIAHVHGLPLLEDLGSGTLVDLTRWGLPKEPTVQEALADGADLVTFSGDKLLGGPQAGL
ILGRQELIGKIKKNPLKRALRVDKLTLAALEAVLNLYRDPERLAERLTTLRLLSRPQLDI
QVQAERLLLAVAAQLGAGWQVTAEPALGMIGSGAQPVARLPSAALCLRPQQPKRLRGRAL
RALEERLRSLPIPVLGRLDDDALWLDLRQLDDEPAFLAQLPHLSVEAP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccttcgcctgccttccgtcgaccgcctgctgcgcagcccggcctgcacgcca
ttgcagcagcgctatggccgcgacgccctgctcaagaccctgcgcgatctgctcgacgag
ctgcgcgagccggcccggcacggccaactggccgccgccgaactgagcgacgcggtgctc
gccgggcgtgccggcgaacgcctggccgcctggcatgcgagcaaggtacggcgggtgttc
aacctcaccggcacggtgctgcacaccaacctcggccgcgcgctgctgccggaggaagcc
atcgaggcgatctgcctggccgcgcgttatccgctcaacctcgaattcgacctcgccagc
ggcaagcgcggtgatcgcgacgacctcatcaccggcctgatctgcgaactgaccggcgcc
gaagccgtcaccgtggtcaacaacaacgccgccgccgtgctgctggcgctgaacagcctc
ggcgcgcgcaagcaaggcatcatctcccgcggagagctgatcgagatcggcggcgccttc
cgcatccccgacatcatggcccgcgccggcgtcaagctggtcgaggtcggcaccaccaac
cgcacccatgcccgcgattacgaggcggcgatcaattcgcgcagcggtctgctgatgcgt
gtgcacaccagcaactacagcgtgcagggcttcaccaccagggtgccgacctttgagctg
gcggccatcgcccacgtccacggtctgccactgctggaagacctcggcagcggcacgctg
gtcgacctcacgcgctggggcctgcccaaagaaccgacggtgcaggaggccctggccgac
ggcgccgacctggtcaccttcagcggcgacaagctgctcggcggcccgcaggccgggctg
atcctcggccgccaggagctgatcggcaagatcaagaagaacccgctcaagcgtgccctg
cgcgtcgacaagctgacactggcggcgctggaagcggtgctcaacctgtaccgcgacccg
gaacgcctggccgaacggctgaccaccctgcgcctgctcagccggccgcaactggatatc
caggtgcaagccgaacgcctgctgctggccgtggccgcgcaactcggcgccggctggcag
gtcaccgcggagcctgccctcggcatgatcggcagcggcgcccagccggtcgcacggctg
cccagcgccgccctgtgcctgcgcccgcagcagcccaaacgcctgcgcggccgtgccttg
cgagcgctggaagaacgcctgcgcagcctgccgatcccggtgctcggccgcctcgacgac
gacgccctgtggctggacctacgtcagctcgacgacgagccggcattcctcgcccaacta
ccgcatctgagtgtggaggcgccgtga
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