Pseudomonas cavernae: D3880_20130
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Entry
D3880_20130 CDS
T08208
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00730
Thiamine metabolism
pcav01100
Metabolic pathways
pcav01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D3880_20130 (thiC)
Enzymes [BR:
pcav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
D3880_20130 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AYC34539
UniProt:
A0A385Z5E7
LinkDB
All DBs
Position
complement(4424713..4426611)
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AA seq
632 aa
AA seq
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MRAEQHKNSSGKNLSESAQVDQQSIQPFPRSQKVYVQGSRPDIRVPMREISLDVTPTAFG
GEINAPVTVYDTSGPYTDPSVTIDVRQGLADVRSAWIDDRGDTEKLPGLSSEFGQRRLND
AELTAMRFAHVRNPRRAKAGHNVSQMHYARKGIITPEMEYVAIRENMKLAEAREAGLLKE
QHAGQSFGASIPKEITAEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNS
ALGSSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPVYQALEKV
GGVAEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWC
LAHHKENFLYTNFEEICEIMQAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIA
WKHDVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAA
MIGWFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKA
RFEFRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVRDYAKE
HGLSEESKAIEVGFKQQAERFKDEGSVIYKQV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccgaacaacataagaattcgagtggcaagaacctgagcgagagcgcccaggtc
gaccagcaatccatccagcccttcccgcgttcgcagaaggtctatgtccaggggtcgcgc
ccggacatccgcgtgccgatgcgcgagatcagcctggatgtgacgccgaccgccttcggt
ggcgagatcaacgccccggtcaccgtctatgacacttccggcccctacaccgatccgagc
gtcaccatcgacgtgcgccagggcctggccgacgtgcgttcggcctggatcgacgaccgc
ggcgacaccgagaagctgccgggcctgagctccgagttcggccagcgccgcctgaacgac
gccgagctgaccgccatgcgcttcgcccacgtgcgcaacccgcgccgggccaaggccggg
cacaacgtcagccagatgcactatgcgcgcaagggcatcatcaccccggagatggaatac
gtcgccatccgcgagaacatgaagctggccgaggcccgtgaagccggcctgctgaaagaa
cagcacgccgggcagagcttcggcgccagcatccccaaggaaatcaccgccgagttcgtc
cgcgaggaaatcgcccgcggccgcgcgatcattccggccaacatcaaccacgtggagctg
gagccgatgatcatcggccgcaacttcctggtgaagatcaacggcaacatcggcaactcg
gcgctgggttcttccatcgaggaagaagtggccaagctgacctggggcatccgctggggt
tccgataccgtcatggatctctcgacgggcaagcacatccacgagacccgcgagtggatc
atccgcaattcgccggtgccgatcggcacggtgccggtgtatcaggcgctggagaaggtc
ggcggcgtcgccgaggacctgacctgggagttgttccgcgacaccttgatcgaacaggcc
gagcaaggcgtggactatttcaccatccacgccggcgtgctgctgcgctatgtgccgttg
accgccaagcgcgtcaccggcatcgtctcgcgtggcggttcgatcatggccaagtggtgc
ctggcgcaccacaaggagaatttcctctacacgaacttcgaggaaatctgcgaaatcatg
caggcctacgacgtcagcttctcgctcggcgacggcctgcgtccgggctcgatcgccgac
gccaacgacgccgcccagttcggtgaactggagaccctcggcgagttgaccaagatcgcc
tggaagcacgacgtgcagaccatgatcgaaggccccggccacgtgccgatgcagctgatc
aaggagaacatggacaagcagctggagtgctgcgacgaggcgccgttctacaccctcggc
ccgctgaccaccgacatcgccccgggctacgaccacatcacctccggcatcggcgcggcg
atgatcggctggttcggctgcgccatgctctgctacgtgacgcccaaggagcacctcggc
ctgccgaacaaggatgacgtcaagaccggcatcatcacctacaagatcgccgcgcatgcc
gccgacctcgccaagggccacccgggggcgcagatccgcgacaacgccctgtccaaggcg
cgcttcgagttccgctgggaagaccagttcaacctcggcctcgacccggacaccgcacgc
agctatcacgacgagacgttgccgaaggactcggccaaggtcgcgcacttctgctcgatg
tgtgggccgaagttctgctcgatgaagatcacccaggaagtgcgcgactacgccaaggag
cacggcctgtcggaggagagcaaggccatcgaggtgggcttcaagcagcaggccgagcgc
ttcaaggacgagggctcggtgatctataaacaggtgtga
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