Pseudomonas cavernae: D3880_20190
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Entry
D3880_20190 CDS
T08208
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D3880_20190 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_20190 (msbA)
Enzymes [BR:
pcav01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
D3880_20190 (msbA)
Transporters [BR:
pcav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
D3880_20190 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
RsgA_GTPase
NB-ARC
AAA_29
AAA_30
DEAD
ABC_ATPase
nSTAND3
nSTAND1
MMR_HSR1
APS_kinase
DUF815
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AYC34551
UniProt:
A0A385Z753
LinkDB
All DBs
Position
complement(4439202..4441010)
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AA seq
602 aa
AA seq
DB search
MSDQHLSASRPSSLKIYFRLLGYVKPYAGLFLVSILGFIIFASTQPMLGGMLKYFVDGLT
NPDAVLFPQIPYLRDLKLLQAVPLLIVLIALWQGLGSFLGNYFLAKVSLGLVHDLRVALF
NNLLVLPNRYFDSHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFVTLLWMNW
KLTLVMLAILPLIALMVGSASRKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEPY
EQQRFLAASQSNTDKQLRMTKTSAVYTPMLQLVIFSAMAVLMFLVLWLRGDASPGDLVAY
ITIAGLLPKPIRQLSEVSSTVQRGVAGAESIFEQLDEVAERDDGTVERERVSGRLEVRNL
SFQYPGTDKRVLDDLSFTAEPGQMIALVGRSGSGKSTLANLIPRFYHHEQGQILLDGVDV
EQYRLRNLRRHIALVTQQVTLFSDSVANNIAYGDLADAPRADIERAAEAAYAKEFIDKLA
HGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLVLDEATSALDTESERHIQAALDRVM
QGRTTLVIAHRLSTIEKADLILVMDQGRIVERGTHAELLALKGYYARLHAMGLEEGAPAD
IA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcagcatctgagtgcctcgcggccttccagtctgaaaatttatttccgcttg
ctgggttatgtgaagccttatgcgggcctgttcctggtcagtattctcggtttcatcatc
ttcgcctccacccagccgatgctgggcggcatgctcaagtacttcgtcgatggcctgacc
aatcccgacgccgtgctcttcccgcagatcccctacctgcgcgacctgaaattgttgcag
gcggtacccttgctgattgtgctgattgccctctggcaaggactggggtcctttctgggc
aactacttcctggccaaggtttccctggggctggtgcatgacctgcgggtggccttgttc
aacaacctgctggtgttgcccaaccgctatttcgacagccacaactccggccacctgatc
tcgcgcatcaccttcaacgtcaccatggtcaccggggctgccaccgatgcgatcaaggtg
gtgatccgcgagggcatgacggtgattttcctgttcgtcaccctgttatggatgaactgg
aagctgaccctggtgatgctcgccatcctgccgctgatcgcgctgatggtcggtagcgcc
agccgcaagttccgcaagcagagcaagaagatccaggtggccatgggcgatgtcacccat
gtcgcctcggaaaccatccagggctaccgggtggtgcgcagcttcggcggcgaaccctac
gagcagcagcgcttcctcgctgccagccagagcaacaccgacaagcagctgcgcatgacc
aagaccagtgcggtctacaccccgatgctgcagctggtgatcttcagcgccatggcggtg
ctgatgttcctcgtgctctggttgcgcggcgatgcctcgccgggcgatctggtcgcctat
atcaccatcgccggcctgttgcccaagccgatccgccagctgtcggaagtcagttcgacg
gtgcagcgcggcgtggccggtgccgagagcattttcgagcagttggatgaagtggcggag
cgcgacgatggcactgtggagcgcgagcgcgtcagcggccgcctggaagtgcgcaacctg
agcttccagtatcccggcaccgacaagcgcgtgctggacgacctcagtttcaccgccgaa
cccgggcagatgatcgccctggtcggccgttccggcagcggcaagtcgaccctggccaac
ctgatcccgcgcttctatcaccacgagcaagggcagatcctgctcgatggcgtcgatgta
gagcagtaccgcctgcgcaacctgcgccggcacatcgccctggtcacccagcaggtgacc
ctgttcagcgacagcgtcgccaacaacatcgcctacggcgacttggccgacgcaccgcgg
gcggacatcgagcgggcggccgaggcggcctacgccaaggaattcatcgacaagctggcg
cacggcttcgacaccgaggtgggcgagaacggcgtgctgctgtccggcggccagcgccag
cgcctggcgatcgcccgcgccctgctcaagaatgccccgctgctggtattggatgaggcc
acttcggccctggataccgagtccgagcggcatatccaggccgcactggatcgcgtcatg
caagggcgcacgacgctggtgatcgcccatcgcctgtcgaccatcgagaaggccgacctg
atcctggtgatggatcagggccgtatcgtcgagcgcggtacccacgccgagttgctggca
ctcaagggctactatgcgcgcttgcacgccatgggcctggaagaaggcgcgcccgcggat
atcgcctga
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