Pseudomonas cavernae: D3880_20540
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Entry
D3880_20540 CDS
T08208
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D3880_20540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcav03400
]
D3880_20540
Enzymes [BR:
pcav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3880_20540
DNA repair and recombination proteins [BR:
pcav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D3880_20540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
WHD_PriA
AAA_30
Zn_ribbon_6
AAA_22
TrwB_AAD_bind
Zeta_toxin
HypA
Motif
Other DBs
NCBI-ProteinID:
AYC34616
UniProt:
A0A385Z644
LinkDB
All DBs
Position
4523970..4526240
Genome browser
AA seq
756 aa
AA seq
DB search
MLRSRGPLWSPRVSDAHSPDVILRLALPSPLRRLFDYRAPPGVARAQLQPGMRLRVPFGR
RELIGILIEVSDRSEVPAAKLKPALELLDARAPLPPALFKLCLWTAQYYQHSLGDTLSWA
LPVLLRQGEPAEARQERFWHLAAGASLDDPRLARAPRQRQALATIAQHPHGVAQQLLSQL
QLNRDSLELLREKGLVHIEVRRHASSERPTRWLAQPELPLNPEQSAAAEAVRAGFGRFHA
FLLAGVTGSGKTEVYLQLIRETLEAGKQALVLIPEINLGPQTLARFEKRFNARIALLHSN
VNDRERLDAWLAARDGEADIIIGTRSALFTPMQRPGLIIIDEEHDASYKQQEGLRYHARD
LALVRARQDNVPILLGSATPSLESLHNAHNGRYALLKLTQRAGGAQQPRFLRLDVKSRPL
DSGLSGPMQQAIAQTLAAGQQVLVFLNRRGFAPTLLCHDCGWLSGCPRCDARMTVHQRSN
ELRCHHCGHVEARPHSCPKCQRLDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKE
AMAQLFATIQRGEPCILIGTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIV
QVAGRAGRAEEPGKVIIQTHLAEHPLLVQLTEQGYFAFAEQALAERRSAGLPPFAHLALL
RAEAHKPGQAEGFLDQACSLAERLLDERRLGGIELLGPVPAPMERRAGRYRAQLLLQASA
RAPLHRLLGAWLLELEQLPSGRAVRWSLDVDPIDLF
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgctaagatcgcgcggtcccctctggagccctcgcgtgtccgacgcccattcgcccgac
gtcatcctgcgcctcgccctgccctcgccgctgcgccgcctgttcgactaccgcgccccg
cccggagtggcgcgcgcgcagctgcagccgggcatgcgcctgcgcgtgccgttcggccgc
cgcgagctgatcggcatcctgatcgaggtcagtgaccgcagcgaggtgccggccgccaaa
ctcaagccggcgctggaactgctcgacgcccgcgcgccgttgccgccggcgctgttcaag
ctgtgcctgtggaccgcgcagtattaccagcacagcctcggtgacaccctcagctgggcg
ctgccggtgctactgcgccagggcgagccggcggaagcgcggcaggaacgcttctggcac
ctggccgcgggcgccagcctcgacgacccgcgcctcgcccgcgcgccacgccagcgccaa
gccctggcgaccatcgcccagcatccgcacggcgtcgcccagcaactgctcagccagctg
cagctcaaccgcgacagcctggagctgctgcgcgagaagggtctggtgcacatcgaggtg
cgccgccacgccagcagcgagcggcccacgcgctggctggcgcagccggaactgccgctc
aacccggagcagagcgccgcggccgaggcggtacgggccggcttcgggcgcttccatgcc
ttcctcctcgccggggtgaccggcagcggcaagaccgaggtctatctgcagctgatccgc
gagaccctggaggcaggcaagcaggcgctggtgctgatccccgagatcaacctcggcccg
cagaccctggcgcgcttcgaaaagcgcttcaacgcgcgcatcgccctgctgcattccaac
gtcaacgaccgcgaacgcctggacgcctggctggcggcgcgcgacggcgaggccgacatc
atcatcggtacccgctcggcgctgttcacgccgatgcaaaggcccgggttgatcatcatc
gacgaggaacacgacgcctcctataaacagcaggaaggcctgcgctaccacgcccgcgac
ctggccctggtgcgcgcgcggcaggacaacgtgccgatcctgctcggctcggccacgccg
tcgctggagagcctgcacaatgcccacaacggccgctacgccctgctcaaactgacccag
cgcgccggcggcgcccagcagccgcgcttcctgcgcctggacgtgaagagccggccgctc
gactcggggctctccgggccgatgcagcaggcgatcgcccagaccctggcggccggccag
caggtgctggtgttcctcaaccgccgcggcttcgctccgaccctgctgtgccacgactgc
ggctggctgtccggctgcccgcgctgcgatgcgcggatgaccgtgcaccagcgcagcaac
gaattacgctgccatcactgcggtcacgtcgaagcgcgcccgcacagctgcccgaagtgc
cagcgcctcgacctgcgcccggtcggcgccggcaccgagcgcgccgaagaacgcctgggc
atcctcttccccgactacccggtgctgcgcgtcgaccgcgacagcacctcgcgcaaggag
gcgatggcccagctgttcgccaccatccagcgcggcgaaccgtgcatcctgatcggcacg
cagatgctcgccaagggccaccactttccacgcgtcaccctggtggcgatcctcgatgcc
gacggcggcctgttctccgccgacttccgcgccagcgagcgcatggcccagctgatcgtc
caagtcgccgggcgcgccgggcgcgccgaggagccgggcaaggtgatcatccagacccac
ctggccgagcatccgttattggtgcagctgaccgagcagggctacttcgccttcgccgag
caggccctagccgaacgccgcagtgccggcctgccgcccttcgcccacctcgccctgctg
cgcgccgaggcgcacaagccgggtcaggccgagggttttctcgatcaggcctgcagcctg
gccgaacggctgctggatgagcggcggctcggcggcatcgagctgctcggcccggtgccg
gcgccgatggaacgccgcgccggccgctaccgcgcacagctgttgctgcaggccagcgcc
cgcgcgccgctgcatcgcctgctcggcgcctggctgctggaactggaacaactgcccagc
ggccgcgcggtgcgctggtcgctggatgtcgacccgatcgacctgttttaa
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