KEGG   Pseudomonas cavernae: D3880_21580
Entry
D3880_21580       CDS       T08208                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pcav  Pseudomonas cavernae
Pathway
pcav00521  Streptomycin biosynthesis
pcav00523  Polyketide sugar unit biosynthesis
pcav00525  Acarbose and validamycin biosynthesis
pcav00541  Biosynthesis of various nucleotide sugars
pcav01100  Metabolic pathways
pcav01110  Biosynthesis of secondary metabolites
pcav01250  Biosynthesis of nucleotide sugars
Module
pcav_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:pcav00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    D3880_21580 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    D3880_21580 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    D3880_21580 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    D3880_21580 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    D3880_21580 (rfbB)
Enzymes [BR:pcav01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     D3880_21580 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 adh_short KR Sacchrp_dh_NADP NmrA
Other DBs
NCBI-ProteinID: AYC34804
UniProt: A0A385Z7M3
LinkDB
Position
4741791..4742873
AA seq 360 aa
MTSRILVTGGAGFIGSAVVRHLIANTSAEVANLDKLTYAGNLESLANAADSSRYRFYPVD
ICDAVALDKVFTEFQPDAVMHLAAESHVDRSIDGPAEFIQTNILGTYSLLEAARAYWNGL
NGERKASFRFHHISTDEVYGDLEGTDDLFSETTPYSPSSPYSASKASSDHLVRAWQRTYG
LPVLITNCSNNYGPYHFPEKLIPHVILNALHGKPLPVYGDGSQIRDWLYVEDHARALVEV
VTRGQVGETYNIGGHNEKRNLEVVETICELLDELVPMAGTDDREQARSYKELITFVTDRP
GHDRRYAIDASKIERELGWVPQESFESGLRKTVQWYLDNREWWQRVLSGDYRLGRLGERA
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgacttcccgcatcctcgtcaccggtggcgccggctttattggctcggcagtggttcgc
catctaattgccaacaccagcgctgaagtcgccaacctcgacaagctgacctacgccggc
aatctggagtcgctggccaacgcggccgactcgtcgcgctaccgtttctacccggtggat
atctgtgatgccgtggcgctggataaggttttcaccgaattccaacccgatgccgtgatg
cacttggccgccgaatcccatgtggatcgctccatcgacggccccgccgaatttatccag
accaatatcctcggcacctacagcctgctggaagcggcgcgtgcttattggaacggcctg
aatggcgagcgcaaggccagcttccgcttccaccacatatccaccgacgaggtgtacggc
gacctggagggcacggatgatctgttcagcgaaaccacaccctactcgcccagctcgccc
tactcggcctccaaggccagttccgaccatctggtgcgtgcgtggcagcgcacctatggg
ctgccggtgctgatcaccaattgttcaaacaactacgggccgtatcacttcccggaaaaa
ctcatcccgcatgtgatcctcaacgccctgcacggcaagccgctgccggtgtatggcgac
ggctcgcagattcgcgactggctgtatgtcgaggaccacgcaagggcgctggtggaagtg
gtgacccgtggccaggtcggcgagacctacaacatcggcgggcacaacgagaagcgcaat
ctcgaggtagtggagacgatttgcgaattgctggatgagttggtgcccatggccggcacg
gatgatcgcgagcaagctcgctcctacaaagagctgattaccttcgtgacggaccgcccc
ggccacgatcggcgctatgccatcgatgcctcgaagatcgagcgcgagctgggctgggtg
ccgcaggaaagcttcgagagcggcctgcgcaagacggtgcagtggtacctggataatcgt
gagtggtggcagcgggtgttgagcggcgattaccgcctgggacgtttgggagagcgggca
tga

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