Pseudomonas cavernae: D3880_22245
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Entry
D3880_22245 CDS
T08208
Name
(GenBank) LysR family transcriptional regulator
KO
K21711
LysR family transcriptional regulator, putative pyruvate carboxylase regulator
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcav03000
]
D3880_22245
Transcription factors [BR:
pcav03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D3880_22245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
HTH_20
PBP_like
Motif
Other DBs
NCBI-ProteinID:
AYC34923
UniProt:
A0A385Z9M1
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Position
4878677..4879630
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AA seq
317 aa
AA seq
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MRKSLMRLTLRQLQVFRAVCESRSYSRAAEEMALTQPAVSLQIRQLEELVGQPLFEYVGK
KLYLTEAAEALHKASGDIFGRLESLDMQLSDLQGSLQGQLKLAVESSAKYFVPHLFAAFK
RQHPEVSLHLVVVNRAQVIKRLADNRDDLVIMSLVPQDMALEFLPFLNNPIVAVAPPEHP
LSHAAQLTLKDLEPYPLLVREPGSGTRKACEEYFQQKRVHFAQTLEVASLDAQRECVVAG
LGLALLPRHALSLELAGGLLRELPVEELPLYRSWCVVHARGKRLSPVGQAFLAFIRSERA
QISALAARFGGTPHVPR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagtccttgatgcgcctgacattgcgccagctgcaggtgttccgtgcagtatgc
gaaagccgctcctacagccgcgcggcggaggagatggcgctgacccagccggcggtcagc
ctgcagatccgtcagctggaagagctggtcggccagccgctgttcgaatacgtcggcaag
aagctctacctgaccgaagccgccgaggcgctgcacaaggccagcggcgacatcttcggc
cgcctggagagcctcgacatgcagctctccgacttgcagggctcgctgcagggccagctc
aagctggcggtggagtccagcgccaagtacttcgtcccgcacctgttcgccgccttcaag
cgccagcatccggaggtcagcctgcatctggtggtggtcaaccgcgcccaggtgatcaag
cgcctggccgacaaccgcgacgacctggtgatcatgtcgctggtgccgcaggacatggcc
ctggaatttctgccgttcctcaacaacccgatagttgccgtggcgccgcccgagcatccg
ctgagccacgccgcgcagctgaccctcaaggacctcgaaccctatccgctgctggtgcgc
gagcccggctcgggcacgcgcaaggcctgcgaggaatacttccagcagaagcgcgtgcac
ttcgcccaaaccctggaagtggcctcgctggatgcgcagcgcgaatgcgtggtggctggc
ctcggcctggccctgctgccgcgccacgcgctgagcctggaactggcgggcggcctgctc
cgcgagctgccggtggaggagctgccgctgtaccgcagctggtgcgtggtgcacgctcgc
ggcaagcgcctgtcaccggtgggacaggcgtttctggcgttcatccgcagcgaacgggcg
cagatcagcgcgctggcggcgcgtttcggcggaacgccgcatgtgccgcgataa
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