Afipia carboxydohydrogena: AFIC_000012
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Entry
AFIC_000012 CDS
T08963
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AFIC_000012 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcax01007
]
AFIC_000012 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcax03016
]
AFIC_000012 (trpS)
Enzymes [BR:
pcax01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
AFIC_000012 (trpS)
Amino acid related enzymes [BR:
pcax01007
]
Aminoacyl-tRNA synthetase
Class I (G)
AFIC_000012 (trpS)
Transfer RNA biogenesis [BR:
pcax03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AFIC_000012 (trpS)
Prokaryotic type
AFIC_000012 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
WEF51577
UniProt:
A0ABY8BNK6
LinkDB
All DBs
Position
15013..16050
Genome browser
AA seq
345 aa
AA seq
DB search
MTAIQRVFSGVQPTGNLHLGNYLGAIVNFVKLQQTHNCIYCVVDLHAITVWQNPVELTHN
IREVTAAFLASGIDPDKHIVFNQSQVAEHAELAWVLNCVARLGWLNRMTQFKEKAGKDRE
NASVGLYAYPNLMAADILVYRATHVPVGEDQKQHLELARDIAQKFNNDFSESIAAKGYDA
KFFPQPEPLITGPATRVMSLRDGSKKMSKSDPSDYSRINLTDDADAIAQKIRKAKTDPEP
LPSEEDGLKARPEADNLVGIYAALSGRTKADVLREFGGGQFSGFKSTLVDLSVDKLGPVG
AEMKRLMQDPGHVDAVLVKGAERARAIAFETMKAVKDIVGFVQPK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgatccagcgggttttttcgggcgtccagccgacgggcaatctgcacctcggc
aactatctcggcgccatcgtcaatttcgtgaaattgcagcagactcacaactgcatctat
tgcgtggtggacctgcacgcgatcacggtgtggcagaacccggttgagctgacgcacaac
atccgcgaggtgacggcggcatttctcgccagcggcatcgatcccgacaagcatatcgtg
ttcaaccagagccaggtcgccgagcacgccgaactcgcgtgggtgctgaactgcgtcgcc
cgcctcggctggctcaatcgcatgacccagttcaaggagaaggccggcaaggatcgcgag
aacgcatccgtcggcctgtacgcctatccgaacctgatggcggcggacattctcgtctat
cgcgcgacccatgtgccggtcggcgaggaccagaagcagcatctggaactggcgcgcgac
atcgcgcagaagttcaacaacgatttctcggagtccatcgccgccaagggctacgacgca
aaattttttccgcagcccgaaccgctcatcaccggcccggcgacgcgcgtgatgagcctg
cgcgacggatcgaagaagatgtcgaagtcagacccgtcggattattcgcgcatcaacctc
accgacgacgccgacgccatcgcgcagaagatccgcaaggccaagaccgatccggaaccg
ctcccctcggaagaagacggcctcaaggcgcgccccgaggccgacaatctcgtcggcatc
tacgcggcactctccggccgcaccaaggccgacgtgctgcgcgaattcggcggcggacag
ttctcgggtttcaaatcgacgctggtcgatctgtccgtggacaagctcggcccggtcggc
gccgagatgaagcggctgatgcaggaccccggccatgtcgacgccgtgctggtgaagggc
gcggagcgcgcccgcgccatcgcgttcgagaccatgaaggcggtgaaggacatcgtcggc
ttcgtgcagccgaaatag
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