Afipia carboxydohydrogena: AFIC_000027
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Entry
AFIC_000027 CDS
T08963
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pcax
Afipia carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcax03021
]
AFIC_000027 (nusA)
03009 Ribosome biogenesis [BR:
pcax03009
]
AFIC_000027 (nusA)
Transcription machinery [BR:
pcax03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AFIC_000027 (nusA)
Ribosome biogenesis [BR:
pcax03009
]
Prokaryotic type
rRNA transcription factors
AFIC_000027 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
S1
KH_NusA_C
KH_1
IMS_HHH_1
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
WEF51590
LinkDB
All DBs
Position
28118..29740
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AA seq
540 aa
AA seq
DB search
MAAVSANKLELLQIADAVAREKSIDRGIVIAAMEDAIAKAARARYGSETDVHAEIDAKKG
ELRLSRHMLVVETVENAANQISLKDAQRANPTAQIGDTIADTLPPLEYGRIAAQSAKQVI
VQKVREAERDRQYQEFKDRIGEIVNGIVKRVEYGSVIVDLGRGEAIVRRDEMLPREALRN
GDRIRAYIFDVRRETRGPQIFLSRTHPQFMAKLFAQEVPEIYDGIVEIKAVARDPGSRAK
IGVISRDSSVDPVGACVGMRGSRVQAVVNELQGEKIDIIPWSPDIATFVVNALAPAEVAK
VVIDEDRERIEVVVPDTQLSLAIGRRGQNVRLASQLTGWDIDILTEQEESERRQADFENS
TRVFMEALNVDEVVGQLLASEGFSSVEELALVDVRELAGIEGFDEETANELQSRAREYLE
QLDAELEAKRKELGVDDALKDIPGVTGKMLVKLGENDVKTVEDLAGCATDDLVGWVERKD
GETVKHAGFLDASETSRDEAEAIIMQARLAAGWITEADLAKSSSDLPAEAEEAASEDHPA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtcagcgccaacaaactggaactgctgcaaatcgccgatgccgtcgcacgc
gaaaagtcgatcgaccgtggaatcgtgatcgccgcgatggaagacgccatcgcgaaagcg
gcgcgcgcccgttacggttccgaaaccgacgtgcatgcggagatcgacgccaagaagggc
gagcttcgcctgtcgcgccacatgctggtggtggagacggtcgagaacgccgccaaccag
atctcattgaaggacgcgcagcgcgccaatccgaccgcgcagatcggcgacaccatcgcc
gacaccctgccgccgctggaatatggccgcatcgccgcgcagtccgccaagcaggtgatc
gtgcagaaggtgcgcgaggccgagcgcgaccggcagtatcaggaattcaaggaccgcatc
ggcgagatcgtcaacggcatcgtcaagcgcgtcgaatacggcagcgtcatcgtcgatctc
ggacgaggcgaagccatcgtgcgccgcgatgagatgctgccgcgcgaggcgctgcgcaac
ggcgaccgcatccgcgcttacatcttcgacgtgcgccgcgaaacccgtgggccccagatt
ttcctgtcgcgcacccatccgcagttcatggcgaagctgttcgcgcaggaagtgccggaa
atctacgacggcatcgtcgagatcaaggcggtcgcccgcgatccgggttcgcgcgccaag
atcggcgtgatttcccgcgattcctcggtcgatccggtcggcgcctgcgtcggcatgcgc
ggctcgcgcgtgcaggcggtggtgaacgaactgcaaggcgagaagatcgacatcattccg
tggtcgcccgacatcgcgaccttcgtcgtcaacgcgctggcacctgcggaagtcgccaag
gtcgtcatcgacgaagaccgcgaacgcattgaagtcgtggtgccggatacccaattatcc
cttgcgatcggccgtcgcggccagaacgtgcgcctcgcatcgcaactcacgggctgggac
atcgacatcctgaccgagcaggaagaatcggaacgccgccaggcggacttcgagaattcc
acgcgcgtgttcatggaagccctcaacgtcgacgaagtggtcggccagttgctggcctcc
gaaggcttctcctcggtcgaggaactcgctctggtcgatgtgcgcgaactcgcgggcatc
gagggcttcgacgaggaaaccgccaacgaattgcagagccgcgcgcgtgaatatctcgaa
cagctcgacgccgagctggaagcgaagcgcaaggaactcggcgtcgatgacgccctcaag
gacattccgggcgtcaccggcaagatgctggtgaagctcggcgagaacgacgtcaagacg
gtcgaggatctcgccggctgcgccaccgacgatctggtcggctgggtggagcgcaaggac
ggcgagaccgtcaagcatgcgggcttcctcgatgcgagcgaaacatcgcgcgacgaggcg
gaggcgatcatcatgcaggcgcgcctcgcggctggctggatcaccgaagccgatctcgcc
aagtcttccagtgacctgcctgcggaagcggaagaagccgcgtccgaagatcatccggcg
taa
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