KEGG   Afipia carboxydohydrogena: AFIC_000031
Entry
AFIC_000031       CDS       T08963                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
pcax  Afipia carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:pcax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pcax03016]
    AFIC_000031 (truB)
Enzymes [BR:pcax01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     AFIC_000031 (truB)
Transfer RNA biogenesis [BR:pcax03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AFIC_000031 (truB)
 Prokaryotic type
    AFIC_000031 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: WEF51594
LinkDB
Position
33655..34740
AA seq 361 aa
MTATPAQGTREAPHGDSHAASEKNISPDTPAPDRADGNRPRQKKQQVKRDRRDVHGWVIL
DKPVGMTSTHAVAVLKRLFNAKRVGHAGTLDPLASGGLPIALGEATKTVPFVMDGRKRYR
FTVRWGEERDTDDVEGRPTQTSDARPSAEAIRALLPQFTGVISQTPPQFSAIKIQGERAY
DLARDGETVALQPREVEIHELVLTEQPDTDHSVFETECGKGTYVRALARDMGRLLGCYGH
ISALRRTQCGPFIEDDMIPLAELEALCDRAASGEGSLADALLPVETALDDIPALAVTRAD
AARLARGQAVLLRGRDAPILNGTVYVTVGGRLLALAEIGNGELIPRRVFNLTGLVANPDR
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgactgcaacacccgctcagggcacgcgcgaagcgccgcatggcgattcgcacgcggcc
tctgaaaaaaatatttcgccggatacgcccgccccggatcgcgcggacggcaatcgtccg
cgccagaagaagcagcaggtcaagcgcgaccgccgcgacgttcacggctgggtcattctc
gacaagccggtcggcatgacctcgacccacgcggtcgcggtgctcaagcgcctgttcaac
gccaaacgcgtcggccacgcgggcacgctcgatccgctcgcatccggcggactgccgatc
gcgctcggtgaagccaccaagacggtcccgttcgtgatggacggccgcaagcgttaccgc
ttcacggtgcgctggggcgaggaacgcgacaccgacgacgtcgagggccgcccgacccag
acctcggacgcccgcccctccgccgaggccatccgggcgctgctgccccaattcacgggc
gtgatttcgcagaccccgccgcagttctcggccatcaaaatccagggcgagcgcgcctat
gacctcgcccgcgacggcgaaaccgtcgcgctgcagccccgcgaggtcgagattcacgaa
ttagtccttacagaacaaccggataccgatcattcggtgttcgagaccgaatgcggcaag
ggaacctatgtccgggcgctggcccgggacatgggccgccttttgggctgttacggccat
atttcggcgctccggcgcacccagtgcggcccgttcatcgaggacgacatgattccgctg
gcggaattggaggctttgtgcgatagagccgcgtctggcgagggcagcctcgccgacgcg
cttttgcccgttgagaccgcgctggacgacatcccggcactggccgtcactcgggcggat
gccgcaaggcttgcaagaggccaggcggttttgttgcgcggacgggatgcgccaattcta
aacggcacagtctatgtcaccgtcggaggaaggcttctggccctcgccgagattggcaat
ggcgaactcatccccaggcgtgtgttcaacctcaccgggctcgttgcgaacccggaccgc
agttaa

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