Pseudomonas carboxydohydrogena: AFIC_000063
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Entry
AFIC_000063 CDS
T08963
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pcax
Pseudomonas carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcax03032
]
AFIC_000063
03036 Chromosome and associated proteins [BR:
pcax03036
]
AFIC_000063
03400 DNA repair and recombination proteins [BR:
pcax03400
]
AFIC_000063
DNA replication proteins [BR:
pcax03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AFIC_000063
Chromosome and associated proteins [BR:
pcax03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AFIC_000063
DNA repair and recombination proteins [BR:
pcax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AFIC_000063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_bac_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WEF51624
LinkDB
All DBs
Position
complement(72179..72487)
Genome browser
AA seq
102 aa
AA seq
DB search
MIKSELVQRIAEHNPHLYQRDVENIVNAILEEIVSALSRGDRVELRGFGAFSVKHRPARA
GRNPRTGEHVPVEQKSVPFFKTGKEMRERLNRNGLDGEAAAS
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatcagaactcgttcagcgcattgccgagcataatccgcatctctaccagagg
gacgtggagaacatcgtcaacgcgatcctcgaggagatcgtctcggcattgtcgcgcggc
gatcgtgtcgaactgcgaggtttcggcgctttctctgtgaagcatcgcccggcgcgcgcg
ggccgcaatccgcgcaccggcgagcacgtgcctgtcgagcagaagagcgtgccgttcttc
aagaccggcaaggaaatgcgtgaacggctcaaccgcaacggcctcgacggggaagccgcg
gcgtcctga
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