Afipia carboxydohydrogena: AFIC_000065
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Entry
AFIC_000065 CDS
T08963
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AFIC_000065 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pcax03011
]
AFIC_000065 (rpsA)
Ribosome [BR:
pcax03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AFIC_000065 (rpsA)
Bacteria
AFIC_000065 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
CvfB_2nd
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
WEF51626
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Position
complement(73789..75489)
Genome browser
AA seq
566 aa
AA seq
DB search
MASTASSYNPSREDFAAMLDESFSGGNLQESSVIKGKVVAIEKDMAVIDVGLKTEGRVAL
REFNGPGRENTIKVGDEVEVFLDRIENALGEAVLSRDKARREESWGKLEKAFNANEKVHG
VIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVGPLMNNSQPFQILKMDRRRGNIVVSR
RTVLEETRAEQRQELVQNLEEGQVIDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNH
PTEVLTIGQTVKVKIIKINHETHRISLGMKQLLDDPWQGIEAKYPLNARVTGRVTNITDY
GAFVELEPGIEGLIHVSEMSWTKKNMHPGKIVSTSQEVEVQVLEVDSAKRRISLGLKQTM
RNPWEVFVEKFPVGATVEGEVKNKTEFGLFLGLDGDVDGMVHLSDLDWKQPGEQVIDNFK
KGDMVKAVVLDVDVEKERISLGVKQLEGDPFAEPGDVKKGAVVTCEILDVKEAGIDVQIA
GTDFTTFIKRSELARDRNDQRAERFAVGEKVDARVIQFDKKARKVQVSIKALEVAEEKEA
IAQYGSSDSGATLGDILGNALKKRDK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactgcatcttcctataacccgagccgcgaggatttcgcggcgatgctcgat
gaatccttttcgggcggcaaccttcaggaaagctctgtcatcaagggcaaggttgtggcg
atcgagaaggacatggccgtcatcgacgtcggcctgaagaccgaaggccgcgtggcgctt
cgcgagttcaacggccccggccgcgagaacaccatcaaggtcggcgacgaagtcgaagtc
ttcctggaccggatcgaaaacgccctcggcgaagccgtgctgtcgcgcgacaaggcgcgc
cgcgaggaaagctggggcaagctcgagaaggcgttcaacgccaacgagaaggttcacggc
gtcatcttcaatcaggtcaagggcggcttcaccgtcgacctcgacggcgctgtggcgttc
ctgccgcgctcgcaggtcgacattcgcccgatccgcgacgtcggcccgctgatgaacaat
tcgcagccgttccaaattctgaagatggatcgccgccgcggcaacatcgtcgtctcccgc
cgcacggttctcgaagagacccgcgccgagcagcgccaggaactggtgcagaacctcgaa
gagggtcaggtgatcgacggcgtcgtcaagaacatcaccgattacggtgcgttcgttgac
ctcggcggcatcgacggcctgctgcacgtcaccgacatcgcgtggcgccgcgtcaaccat
ccgaccgaggtgctgaccatcggccagacggtgaaggtcaagatcatcaagatcaaccac
gagacccaccgcatctcgctcggcatgaagcagctgctggacgatccgtggcagggcatc
gaggcgaagtatccgctcaacgcccgcgtcaccggccgcgtcaccaacatcaccgactac
ggcgcgttcgtcgaactggagccgggcatcgaaggcctgatccacgtctcggagatgtcg
tggaccaagaagaacatgcatcccggcaagatcgtttcgacctcgcaggaagtcgaagtg
caggtgctggaagtggattcggccaagcgccgcatctcgctcggtctcaagcagaccatg
cgcaatccgtgggaagtgttcgtcgagaagttcccggtcggcgcgaccgtggaaggcgag
gtcaagaacaagaccgagttcggcctgttcctgggtctcgacggcgacgtcgacggcatg
gtgcatctgtccgacctcgactggaagcagccgggcgagcaggtgatcgacaacttcaag
aagggcgacatggtcaaggccgtggtgctcgacgtggatgtcgagaaggagcgcatttcg
ctcggcgtcaagcagctcgaaggcgaccccttcgcggagcctggcgacgtcaagaagggc
gcggtcgtgacttgcgaaatcctcgacgtgaaggaagccggcatcgacgtgcagatcgcc
ggcaccgacttcaccaccttcatcaagcgttcggaactcgcgcgcgatcgcaacgaccag
cgcgccgagcgcttcgccgtcggcgagaaggtcgatgcccgcgtcatccagttcgacaag
aaggcccgcaaggtccaggtgtcgatcaaggcgcttgaggtggccgaggagaaggaagcc
atcgcgcagtacggatcttcggattcgggcgcgacgctgggcgacattctcggcaacgcg
ctgaagaagcgcgacaagtaa
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