Pseudomonas carboxydohydrogena: AFIC_000107
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Entry
AFIC_000107 CDS
T08963
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K15727
membrane fusion protein, heavy metal efflux system
Organism
pcax
Pseudomonas carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_000107
Transporters [BR:
pcax02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AFIC_000107
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Aegyptin_C
DUF1151
Motif
Other DBs
NCBI-ProteinID:
WEF51665
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Position
120089..121306
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AA seq
405 aa
AA seq
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MMSRSTIVALAFAAGAAIFAFTPGLSTIAQRAVGIGPQSKRAISTKPSAPEPISGFLSMS
DEQIKLAQIDLVDVGPAAIAKRLVVPGSVVPDANLVAHVSVKLSGTVAELRKNIGEDVAK
DEVVAVLESREVADAKSEYLAAKLTNDLQQDLSTRDKTLWDSRVGTEQQYLRSRNAAAQT
EMRVKIARQKLLALGLGEREITAVPEAPEASLRRQDVRSPISGRVAERKVELGTAVGRDS
LETELFVVVDLSRVWVELSVASSDLPLIKEGQSVKISARGLADTTIGKIVFVSPLVDKDT
RTARVVTEISNPDQAWRPGSFVTAGIVLDEQTVAVAVPATAIQKLDGQPIVFVRTKDGFE
KRNVVVGESEDQAVEIVSGLTPGEAIAATNTFPLKAELSKLRDED
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtcgctcgacaatcgttgcgcttgcgttcgcggcaggagccgcgattttcgcg
ttcactccggggctgtcgacgatcgcccaacgagcggtcggaataggcccccagtcgaag
agagcaatttcgacgaagccgtcggcacctgagccgatctccggctttctttctatgagc
gatgagcaaatcaagctcgcgcagatcgatctggtcgatgtcggaccggcagcaatcgcc
aagcgtctcgtcgttccgggttcggtcgttcccgacgcgaacctggtcgcgcatgtctca
gtcaagctatccgggacggtcgcagagctgcgcaagaatatcggtgaagatgtcgcaaag
gatgaagtggtcgccgtcctagaaagtcgcgaggtcgcagatgccaagagcgaatactta
gcagccaagctcacaaacgatctgcaacaggatttgtccacgcgtgacaagacgctttgg
gacagccgtgtaggcaccgaacagcaatacctacgctcacgcaacgcagcggcgcaaacc
gaaatgcgcgtcaagatcgcgcggcagaaattactcgcgttgggcctcggcgaaagggag
atcaccgcggtgcccgaggctccagaggcctcgcttcgacgccaggatgtacgttcgcca
atctctgggcgggtggccgaacgcaaggtggagttgggcacagccgttggacgggacagt
ctggagaccgaattgttcgtcgtggtcgatctgagccgcgtctgggtcgaattgtctgtc
gcctcctccgacctcccgttgatcaaggaaggccaatcggtcaaaatttctgcgcgaggt
cttgccgacacaaccatcggcaagatcgtcttcgtgagcccgctggtcgacaaggatacg
cgcaccgcgcgcgttgtgactgaaatctcgaatcccgaccaggcctggcgtccgggatcg
ttcgtcacggcggggatcgtccttgatgagcagaccgtagctgtcgcggtgccagcgacc
gcaattcagaagctggacggccaaccgatcgtgttcgtccggacgaaagacggcttcgag
aagcgcaacgtcgtggtcggcgagagcgaggatcaggccgtcgagatcgtatccggtctg
acgcccggcgaggccatcgcggcgacgaacacgttcccgcttaaggccgagctttcgaag
ctgcgggacgaggactga
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