Afipia carboxydohydrogena: AFIC_000149
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Entry
AFIC_000149 CDS
T08963
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFIC_000149
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_000149
Transporters [BR:
pcax02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AFIC_000149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_21
SMC_N
AAA_16
AAA_29
Mg_chelatase
nSTAND3
nSTAND1
DUF87
RsgA_GTPase
AAA_25
NACHT
AAA_33
AAA_5
ATPase
NB-ARC
TsaE
Motif
Other DBs
NCBI-ProteinID:
WEF51704
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Position
164678..166558
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AA seq
626 aa
AA seq
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MMTPDRPLLEVRNLCVTLPVGERKLYAVRDISFTLERGEALGVVGESGSGKSMTSLALMN
LLPRNAIREADVLRLGEQDLLAMDRQEFSRSLAGKRMAMIFQEPMTSLNPVYTIGQQIME
MTAPSLAKTAKDIRDRAVYLLERIGIPDAAGRLKQYPHELSGGLRQRVMIAMMLMNEPDL
LIADEPTTALDVTVQASILKLLMELRKELGMALILVSHDLGVVSQSMDKIAVMYAGELVE
TGPVADVLGAPQHPYTQGLLASIPAARDGGARLPSIPGTVPALFAEPKGCVFAQRCIHVQ
AECRTSRPPEQSLGETHLYRCVMTPDSHRLSLATPPSAHAIASKAASGALLSARHVGCTF
TIRTGLLAKSRTLTAVDDVSLDIAEGEIVALVGESGSGKSTLARILLGLQAPDKGEVLIA
GTPVQSVPPFERAKLVQPVFQDPYSSLNPRKTIGQSIGRPLELHGQDSPAEREKIVERTM
ELVGLPKRLFNNYPSQLSGGQRQRVAIARAIILKPKLLICDEPTSALDVSVQAQILNLLL
DLRDELGLSYLLITHDLAVVDCVATRIAVMHRGRIVETGSKNDVLSTPRDPYTRTLLGSV
LKIDMPALKARAGHAPGLQDHNGLLR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccccggatcgtccgcttctcgaagtccgtaatctctgcgtcacgctgccggtc
ggcgagcgcaagctctacgccgtgcgcgatatcagcttcacgctggagcgcggcgaggcg
cttggcgtcgtcggcgaatccggctcgggcaagtcgatgacctcgctggcgctgatgaat
ctgttgccgcgcaatgcgatccgcgaggcagacgtgctgcggctcggcgagcaagacctt
ctcgccatggacaggcaggagttctcccgctcgctcgccggcaagcgcatggcgatgatt
tttcaggagccgatgacatcgctgaacccggtctacaccatcggccagcagatcatggaa
atgacggcgcctagccttgcgaaaaccgcgaaggacattcgcgaccgagccgtctatctg
ctggagcggatcggcattcccgatgcggcgggccgcctcaagcagtacccgcatgaattg
tccggcggcctgcgccagcgcgtgatgatcgcgatgatgctgatgaacgagccggatctg
ttgatcgcggacgagccgaccaccgcgctcgacgtcaccgtgcaggcgagcatcctcaag
cttctgatggagctgcgcaaggaactcggcatggcgctcattctggtgagccacgatctc
ggcgtcgtgtcgcagagcatggacaagatcgcggtgatgtatgcgggcgaactcgtggag
accgggccggtcgcggacgtgctcggcgcgccgcaacatccttacacgcaaggactgctc
gcctcgatcccggccgcccgtgatggcggcgcgcggctgccgagcattcccggcaccgtg
cccgcattgttcgccgagccgaagggctgcgtgttcgcgcaacgctgcatccatgtgcag
gccgagtgccgcacctcgcgtccgccggaacaatctctgggcgagactcatctttatcgc
tgcgtgatgacgccggactcgcaccgcctctctctcgcaactccaccatccgcgcacgcc
atcgcatcgaaagcggcatccggcgcgctgctctccgcgcgccatgtcggctgcaccttc
acgatccggacaggacttcttgccaagagccgtacgctcaccgccgtcgatgacgtttcg
ctcgacatcgccgagggcgagatcgtggcgctggtcggtgaatcgggcagcggcaagagc
acgctggcgcggattctgctcggcctgcaagcgcccgacaaaggtgaagtgctgatcgcg
ggcactccggtgcagtcggtgccgccgttcgagcgcgcgaaactcgttcagccggtgttt
caggacccgtattcgtcgctcaatccacgcaagaccatcggccagagcatcggccgcccg
ctcgaactgcacgggcaggattcgcccgccgaacgtgagaaaatcgttgagcggacgatg
gagctggtcggcctgccgaaacgcctgttcaacaattatccgtcgcaactctccggcggc
cagcgccagcgcgtcgccatcgcgcgcgcgatcatcctcaagcccaaactcctgatctgc
gacgagccgacctcggcgctcgacgtttccgtgcaggcgcagattctcaatctgctgctc
gacctgcgcgacgagctggggctgtcgtatctgctcatcactcacgatctcgcggtcgtg
gactgcgtggcgacgcggatcgcggtgatgcatcgcggccgcatcgtcgaaacgggcagc
aagaacgatgttctttcgacgccgcgcgatccctatacgcggacgctgctcggctccgtt
ctgaaaatcgatatgcctgccctgaaggcgcgcgccggtcatgcgccgggcttgcaggat
cacaatggtttgttgcgttaa
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