Afipia carboxydohydrogena: AFIC_000206
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Entry
AFIC_000206 CDS
T08963
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax03030
DNA replication
pcax03430
Mismatch repair
pcax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFIC_000206 (holA)
03430 Mismatch repair
AFIC_000206 (holA)
03440 Homologous recombination
AFIC_000206 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcax03032
]
AFIC_000206 (holA)
03400 DNA repair and recombination proteins [BR:
pcax03400
]
AFIC_000206 (holA)
Enzymes [BR:
pcax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFIC_000206 (holA)
DNA replication proteins [BR:
pcax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFIC_000206 (holA)
DNA repair and recombination proteins [BR:
pcax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFIC_000206 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
Peptidase_C15
Motif
Other DBs
NCBI-ProteinID:
WEF51759
UniProt:
A0ABY8BP47
LinkDB
All DBs
Position
complement(222594..223622)
Genome browser
AA seq
342 aa
AA seq
DB search
MTALRGKEIDSFLARPDPARPVILLYGPDAGLVRERADALLASAVDDPNDPFSMVKIDGD
ELAADPSRLVDEAMTVPLFGSRRAIRIRAGARNFASGIDTLADMTPKDCLIVIEAGELRP
DAPLRKACERSRTAVAIACYADTERDLARLIDEELRPIGATISSDARAALVGLLGGDRQA
SRNEIRKLALYAHGAKEVTLADVAAVVTDASALALDPIIDGAFSGKVTVMEAAYAKAIAA
GTYPGQIIASAQRHAAQLHKARLALDDGRSEGDALDGGFPRLHFSRRTPVEAALRNLSSE
RLLRIITLLADAALEMRRQADLAATIGQRALMAIAVNARQRR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgctgcgcggcaaagagatcgattccttcctcgcccggcccgatccggcgcga
ccggtgatcctgctttacgggccggatgcgggcctcgtacgcgagcgcgccgatgcgctg
ctcgcttccgccgtggacgaccccaacgatccgttctcgatggtgaaaatcgacggcgac
gagctggccgccgatccctcgcgtctcgtcgatgaagcgatgacggtgccgctgttcggc
agccggcgcgccatccggatccgcgcgggcgcgcgcaatttcgccagcggcatcgacacg
cttgccgacatgacgccgaaggattgcctcatcgtcatcgaggccggcgaactgcgcccg
gacgcgccgctgcgcaaggcctgcgagcgttcccgcaccgcggtcgcgatcgcctgttac
gccgacaccgagcgcgacctcgcccgcctgatcgacgaggaactgcggcccattggagcg
accatctcgtccgatgcccgcgcggctctggtcggcctgctcggcggcgaccggcaggcc
tcacgcaacgaaatccgcaagctcgcgctctacgcccacggcgcgaaggaagtgacgctg
gccgatgtcgccgccgtggttaccgacgcctccgcgctggcgctcgatccgatcatcgac
ggcgctttctcggggaaggtcacggtaatggaagcggcctacgcaaaggcgatcgcggcc
ggcacctaccccggccagatcatcgcttccgcccagcgccatgccgcgcaactgcacaag
gcgcggctcgcgctcgacgacggccgcagcgagggcgacgcgctcgatggcggctttccc
cggttgcacttttcgcgacgcacaccggtcgaagccgcgttgcgaaatctctcctccgag
cggctgctgcggatcatcacgcttctggccgatgccgcccttgagatgcgccggcaggcc
gacctcgccgccaccatcggccagcgcgccctgatggcgatcgcggtcaacgcccggcaa
cgccgttaa
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