Afipia carboxydohydrogena: AFIC_000346
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Entry
AFIC_000346 CDS
T08963
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax00550
Peptidoglycan biosynthesis
pcax01100
Metabolic pathways
pcax01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFIC_000346
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AFIC_000346
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcax01003
]
AFIC_000346
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcax01011
]
AFIC_000346
Enzymes [BR:
pcax01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
AFIC_000346
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AFIC_000346
Glycosyltransferases [BR:
pcax01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
AFIC_000346
Peptidoglycan biosynthesis and degradation proteins [BR:
pcax01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
AFIC_000346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WEF51891
UniProt:
A0ABY8BSF9
LinkDB
All DBs
Position
complement(357172..359442)
Genome browser
AA seq
756 aa
AA seq
DB search
MARKKSGGRREPKFEGKASLDGLRLNRSDRVGDNSDFEDEDEPPARREKPEPRERKASTN
KASKGGSRRASKAPFRKRFGRIAYWGVVLGLWAMIAAVGGVIWVGAHLPSISSLEIPKRP
PTIQIVGTDGSVIATRGEMPGANVSLKDLPPYLPNAFIAIEDRRFYSHFGIDPIGIARAA
IANILHRGVSQGGSTLTQQLAKNLFLTQERTLQRKLQEAELALWLERKYSKKTILELYLN
RVYFGSGAYGVEAAAQKYFGKPAKDVTLFEAAMLAGLVKSPSRLAPNRNPEGAEKRADTV
LAAMVDAKLITPAQQKAALAHPSFAVKPTGAGTINYVADWIGEVLDDLIGQVDQNIVVET
TIDPKLQGVAETAIIDELAAKSVKYNVSQGALVSMTPDGAVRAMVGGRNYAESQFNRAVT
AKRQPGSAFKPFVYLTALEAGLTPDTVRQDAPIDVKGWKPENYSHQYFGPVTLTQALAMS
LNTVAVRLGLEVGPQNVVRTAHRLGIASKLEPNATISLGTSEVSPTELVGAYATFANNGI
AVSPHVIMRIKAADTGKVLYVRPPDPASQVIDPRYVAMMNGMMHETLVIGTAKKADIPGW
YAAGKTGTSQDFRDAWFVGYTAHLVTGVWLGNDDSSPTRKATGGGLPVEVWTRFMRAAHQ
GVPVANLPVPQPGNPVSDFFQSFSRGGNAPAPQQLGPAPSDQATYAREPSYGASRYAQPA
PSRGGNPRPAQTSGRPEADAGLSGGGWLMDRLFGGR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaaaaaatcaggcggacgccgcgaaccgaaattcgagggcaaggcgtccctc
gacggcttgcgcctgaaccgcagcgaccgcgtcggtgacaacagcgatttcgaggacgag
gacgagccgcccgcgcgccgcgagaagcccgaaccgcgcgaacgcaaggcgtccacaaac
aaggcttccaaaggcggatcccgccgcgccagcaaagctcctttccgcaagcgcttcggc
cgcatcgcctattggggcgtcgttctcggcctgtgggcgatgatcgccgccgtcggcggc
gtgatctgggtcggcgcgcatctgccctcgatcagctcgctggaaattccaaagcgaccg
ccgacgatccagatcgtcgggaccgatggttccgtgatcgccacgcggggcgagatgccg
ggcgccaacgtctcgctgaaggatctgccgccctatctgccgaacgccttcatcgccatc
gaggaccggcggttctactcgcatttcggtatcgacccgatcggcatcgcgcgcgccgcc
atcgccaacatcctgcatcgcggcgtttcgcagggcggctccacgctgacgcaacagctc
gccaagaacctgttcctcacgcaggaacgcacgctacagcgaaaattgcaggaggctgaa
ctcgcgctgtggctggagcgcaaatacagcaagaagacaattcttgagctctatctcaac
cgcgtctatttcggctccggcgcctatggcgtcgaagcggcggcgcagaaatatttcggc
aagcccgccaaggacgtgacgctgttcgaggcggcaatgctcgcgggcctcgtcaagtcg
ccgtcgcggctagcgcccaaccgcaacccggaaggcgcggagaagcgcgccgacactgtc
ctcgcggcgatggtggacgccaagctgatcacgcccgcgcagcagaaggccgcgctcgcg
catccgtcctttgcggtgaagccgaccggtgcgggcaccatcaactatgtcgcggactgg
atcggcgaggtgctcgacgatctgatcggtcaggtcgatcagaatatcgtggtcgaaacc
accatcgatcccaaactgcaaggcgtggcggaaaccgccatcatcgacgaactcgccgcc
aagagcgtgaagtacaatgtcagccagggcgcgctggtttcgatgacgccggacggcgcg
gtgcgcgccatggtcggcggacgcaactacgccgagagccagttcaatcgcgcggtcacc
gcgaagcggcagccgggctcggcgttcaaacccttcgtctatctcaccgcactggaagcg
gggctgacgcccgacaccgtacgtcaggatgcgccgatcgacgtcaagggctggaagccg
gagaattacagccatcagtatttcggacccgtcacgctgacgcaggcgctggcgatgtcg
ctcaacaccgtggcggtgcggctcggccttgaagtcggcccgcagaatgtggtgcgcacc
gcgcaccggctcggcatcgcctccaagctcgagccgaacgccacgatttcgctcggcact
tcggaagtgtccccgaccgaactcgtcggcgcttacgccaccttcgccaataacggcatc
gccgtctcgccgcacgtcatcatgcgcatcaaggccgccgacaccggcaaggttctctat
gtgcgcccgcccgatcccgcctcgcaggtgatcgatccgcgctacgtcgcgatgatgaac
ggcatgatgcatgagacgctggtgatcggcaccgcgaagaaggctgacattccaggctgg
tacgccgccggcaagaccggcaccagccaggatttccgcgacgcatggtttgtcggctac
accgcgcatctcgtcaccggcgtgtggctcggcaacgacgacagttctccgaccaggaag
gccaccggcggcggccttccggtggaagtatggacgcggttcatgcgcgccgcgcatcag
ggcgtgccggtcgcgaacctgccggtgccgcaaccgggcaatccggtcagcgatttcttc
cagtcgttctcgcgcggcggcaacgcgccagcgccgcaacagcttggcccggcgccatcg
gatcaggccacctatgcgagggagccatcgtatggcgcgagccgctatgcccagcctgct
ccgtcgcgcggcggcaaccctcggcctgcgcaaacctcgggacggccggaagccgacgcc
gggttgtccggcggcggctggctgatggatcgactgttcggcggtcgatag
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