Pseudomonas carboxydohydrogena: AFIC_000476
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Entry
AFIC_000476 CDS
T08963
Name
(GenBank) efflux RND transporter permease subunit
KO
K15726
heavy metal efflux system protein
Organism
pcax
Pseudomonas carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_000476
Transporters [BR:
pcax02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AFIC_000476
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
DUF5693
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WEF52018
LinkDB
All DBs
Position
complement(499656..502811)
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AA seq
1051 aa
AA seq
DB search
MTNGDLGTHAGPQAALVSFAIRFRGIVLALACALLGYGLYSLASAKYGVFPEFAPPQVAI
QTEAPGLSPEQVEILVTQPIETSINGLAGVESMRSSSIQGLSVITVVFHPSSDIYRARQL
VNERLAVVAARLPQGVQPPAMTPLTPTAGTVLVIGLTSDQRSLMDLRTIADWTVARRLLA
VPGVAQVSTYGRDVRSLQVQVRPDDLIRFRVGMNDVLAAARKATGVRGAGFVDTVNQRIT
LQTFGQSLTPEQVARTVLMHEGGASIVLGDVANVVVAPEPPIGAALINGRPGVVLMLSQQ
YGANTREVTTRVEAALQELRPALEREKVQLHADLFRPANFIDTATQNVLHALLIGGALVI
IILFLFLFDWRTSIISCTAIPLSLVAAVLALQWMGETLNTMTLGGLAIAIGEVVDDAVIG
VENVVRRLRENRRLAEPRAEGRVVLDAILEVRSAVVYATFAVLLVFFPVLTLSGVGGRLF
GPLGIAYILAVLASLAVALTVTPALSMLLLVGKNRREHRDPPVVRLSRGYYETLLRRIER
FPRLVVATAVALTIAGATMLPFFGGTFLPDLKEGHLILHVSAIPGTSLDESLRIGGLITE
ALQKVPGVRSVAQRAGRAEAGVDTVGPHYSEFEVDLQPGLSGHDQTMAETRMREALANFP
GISFSLKTYLMERVEETVSGFTAALAVNVYGADLDALERAARDVARELGEVPGAVDVQQQ
SPPGMPQINVSLRPADLQRWGLDAVEVLELIRTAYQGDVVGQAYEGNAVFNVTVILDAQA
RVRLTQIGDLPLRTSGGAYVLLKQVADVYETSGRYQVLHRGAQRVQTVTANVSGRDLASF
VSDAKRKIAKDVALPPGAHVEFAGAAEAQAQSQRDLLVNALLAGIGIVLLLSIVTGHWRN
LVLVLINLPFAFVGGVFAVALTGGLLSLGSLVGFVTLFGITLRNSILMISHYEHLVMIEG
RAWDLETAVEGAADRLVPILMTSLVTGLGLLPLALGAGEPGREIEGPMAIVILGGLMTSM
ALNLLVLPTLALRYARFDRGKTGVRRGKAMA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgactaacggcgatctcggtacccacgcggggccccaggcagctctggtctcgtttgcc
attcgcttccgtggaatcgtgctcgctttggcgtgcgcgctgttgggctacggattgtat
tcgcttgcgagcgccaagtatggcgtgtttcccgaattcgcgccgccgcaagtcgcgatc
cagacggaagcgcccgggctgagcccggagcaagtcgagattcttgtcacccagccgatc
gaaacgtccatcaacgggttggcgggcgtcgaaagtatgcgctcatcctcgattcagggc
ttgtcggtcatcaccgtcgtattccaccccagcagcgacatttaccgtgcgcgccaactc
gtcaacgagcgcctcgcggtggtcgccgcccggctcccgcagggcgtccagcctcccgcg
atgaccccgttgaccccaaccgccggcacagtccttgtcatcggtctgacgtccgaccag
cgctcgctgatggatttgcgcaccatcgcggattggaccgtggcgaggcgcctgttggcc
gtgccaggtgtcgcgcaggtttcgacctacggcagagacgtgagatccctccaggtgcag
gtccgcccggacgatctgatccggtttcgggttggcatgaacgacgtcctggctgccgcg
cgcaaggccaccggggtgcggggcgccggtttcgtagacacggtcaatcagcgcattacg
ctccagacctttggccagtcgttgaccccggagcaagtcgcccgcaccgttctgatgcat
gagggcggcgcaagcatcgtgctcggggacgttgcgaacgtcgtcgtagctccggaaccg
ccgatcggtgccgctctcatcaatggcaggcctggcgtcgtgctgatgttaagccagcaa
tacggagccaacacgcgggaagtcacaacacgggtggaagctgcgctgcaggagctgcga
cccgcccttgagcgcgaaaaggtgcaacttcatgccgacctgtttcggccggccaacttc
atcgacacggcaacccagaacgtgctgcacgccctgctgatcgggggggcgctggtgatc
atcattctgttcctcttcctgttcgactggcgcacctcgatcatcagctgtaccgcgatc
ccgctctcgctggtcgcggcggtgcttgccctgcaatggatgggtgagaccctcaatacc
atgacgctcggcgggctcgccattgccatcggcgaggtggtcgatgatgcggtgatcggc
gtcgagaacgtcgtgcgccgattgcgcgagaatcgccgattggctgagccgagagccgag
ggccgcgtcgtgctcgacgcgatccttgaggtccgcagcgccgtcgtgtacgcgaccttc
gctgtcttgctggtgttctttccagtcctcacgctctctggcgtcggcggacgtctgttc
gggcctttgggcatcgcctacatccttgcggtgcttgcctcccttgcggtcgcgctgacc
gttacacccgcgctttcgatgttgctgctcgtcggaaagaaccgaagagagcatcgggac
ccgccagtggtccgcttgtcgcgcggctattatgagacactgctccggcgtatcgagcgc
ttcccgaggctcgtcgtcgcaacagcggttgcccttacgatcgcgggcgcaaccatgttg
ccgtttttcggcggaactttcctgcccgatctgaaagaaggccatctgatcttgcacgtg
tcggcgatcccgggcacttcgctcgacgagtcgcttcggatcggaggcctgatcacggaa
gctctacaaaaggttccgggcgtgcgcagcgtcgcacagcgcgcagggcgcgccgaagcc
ggcgtggataccgtaggcccgcattacagtgagttcgaggtcgatctgcagccggggctt
tccggtcacgatcaaaccatggccgaaacgcgcatgcgggaggcccttgccaacttcccc
ggcatcagtttctcgctcaagacctatttgatggagcgagtggaggaaacggtatcgggc
tttaccgctgcgctggccgtgaacgtatacggcgctgacctggacgcattggaaagagcc
gcacgcgacgtggcccgcgagctcggcgaggttccaggcgctgtggatgtccagcaacaa
tctccgccggggatgccgcagatcaacgtgtcgctacgtcccgccgacctccagcgatgg
ggcctcgatgccgttgaagtgcttgagctgatccgcactgcctaccagggcgatgtggtc
gggcaggcctacgaaggcaatgcggtcttcaatgtgaccgtgatcctcgacgcgcaggcg
cgcgtccggcttacgcagattggcgatctccctctgcggacgtcgggcggagcctacgtt
cttctgaagcaggtggccgatgtctacgaaacatccggtcggtatcaggtcctgcatcga
ggcgcgcagcgcgttcagacggtgactgcgaacgtgagcggacgtgatctcgcgtcgttc
gtcagtgacgccaagcggaagatcgccaaggacgtcgcgttaccacccggagcacacgtg
gagtttgccggggcggccgaggcgcaagctcagtcgcagcgcgatctgctggtcaacgcg
ttgctggcggggatcggcatcgttcttctgctttcgattgtcaccggtcactggcgcaac
cttgttctggttctgatcaatctgccgtttgctttcgtgggcggagtctttgcggtcgct
ttgaccggtggactgctctcgcttggatcgctggtcggcttcgtaaccctgttcggcatc
acgttgcgcaattccattctgatgatttcgcactacgaacatctcgtcatgatcgagggc
cgtgcctgggaccttgagaccgccgtcgagggcgcggcggatcgactcgttccgatcctg
atgacctctctggtgaccggcctcggtttgcttccgctcgcgcttggcgcgggcgagccg
ggccgcgagatcgaaggacccatggcgatcgtcatcctcggcggtctcatgacctcgatg
gcgctgaaccttctggtcttgccgacgctggcgcttcgatacgcccgcttcgatcgtgga
aagacaggtgtgcgtcgagggaaggcgatggcctga
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