Pseudomonas carboxydohydrogena: AFIC_000545
Help
Entry
AFIC_000545 CDS
T08963
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pcax
Pseudomonas carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcax03016
]
AFIC_000545 (truA)
Enzymes [BR:
pcax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AFIC_000545 (truA)
Transfer RNA biogenesis [BR:
pcax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFIC_000545 (truA)
Prokaryotic type
AFIC_000545 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
WEF52083
LinkDB
All DBs
Position
573507..574244
Genome browser
AA seq
245 aa
AA seq
DB search
MPRYKLIIEYDGTPFCGWQYQDNGPSVQGALEDAVHAMTGSRVRVNGAGRTDAGVHALGQ
VAHIDLEKTYRADRVRDALNAHLRPHPIGVLSAEIVPETFEARFSALKRHYIYRISNRRA
NLALDVNHAWRVARPLDVAKMQDAAQVLIGKHDFTTFRDTECQAKSPEKTLDQLDVVRHG
DAVNIITSARSFLHSQVRSMVGSLVWVGHGRWNADDMRKALNARNRAACGPVAPPDGLYL
VKVDY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctacaagctcatcatcgaatatgacggcacgccgttttgtggctggcagtat
caggacaacggcccatcggtacagggcgcgctggaagatgccgtccatgcaatgacggga
agccgtgtgcgcgtgaatggcgcgggccgcaccgatgccggcgtgcatgcgctggggcag
gtcgcgcatatcgatctggaaaaaacctatcgcgccgatcgcgtgcgtgacgcgctgaac
gcgcatctgcggccgcatcccatcggcgtgttgtcggcggagatcgtgccggagacgttc
gaggcgaggttctcggcgctcaagcggcactacatctatcgcatcagcaaccgccgcgcg
aacctcgcgctcgatgtgaatcatgcgtggcgcgtggcgcggccgctcgatgtcgcgaaa
atgcaggacgccgcgcaggtgctgatcggcaagcacgatttcacgacattccgcgacacc
gaatgtcaggcgaagtcgccggagaagacgctcgatcagcttgatgtcgtgcgccacggc
gatgccgtcaacatcatcacctccgcacgttcgttcctgcacagccaggtccgctcgatg
gtcggctcattggtctgggtcgggcatgggcgctggaatgctgacgacatgcgcaaggcg
ctcaatgcgcgcaatcgcgccgcctgtggtccggtcgcaccgccggacgggctatatctg
gtgaaggtggattactga
DBGET
integrated database retrieval system
