Afipia carboxydohydrogena: AFIC_000581
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Entry
AFIC_000581 CDS
T08963
Name
(GenBank) ABC transporter ATP-binding protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AFIC_000581
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_000581
Transporters [BR:
pcax02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
AFIC_000581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
SMC_N
AAA_22
AAA_29
AAA_25
ABC_ATPase
DEAD
Pox_A32
ATP-synt_ab
nSTAND3
GvpD_P-loop
MobB
DO-GTPase2
EspG
Motif
Other DBs
NCBI-ProteinID:
WEF52117
LinkDB
All DBs
Position
612478..614115
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AA seq
545 aa
AA seq
DB search
MDTSSQPLLDVRDLSVAFRQGGKISIAVDKISFTIHRGECVALVGESGSGKSVSALSVLK
LLPYPTASHPSGSIKFNGRDLLPLDENEMRGVRGNDISIIFQEPMTSLNPLHTIEDQIGE
ALLLHGGLRGKAARARTLELLTQVGIPDPETRLGAYPHQLSGGQRQRIMIAMALANEPDL
LIADEPTTALDVTVQAQILKLLADIRARLGMSLLFITHDLGIVRRIADRVCVMHNGKIVE
QGPVEQVFTAPQHDYTKALLAAEPKPDPAPPRPDESVVMQADDLKVWFPIKRGLLRKTVG
HVKAVDGVSLAVRKGETLGVVGESGSGKTTLGLALLRLISSEGPIVFLGKPIQGLRFKEM
RPFRRDMQIVFQDPYGALSPRMSVNDIVAEGLSVHQPSLSAAEREARVVKALTDVGLDPQ
VRFRYPHEFSGGQRQRISVARAIVLEPDFVVLDEPTSALDMLFQAQMVDLLRSLQRKRDL
TYMFISHDLRVVASLASHLIVMRQGKVVEEGEATTLFKNPKTDYTRALFAAAFNIEADAT
IAPEA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggatacaagctcgcaacccttgctcgatgtgcgggacctatcggtggctttccggcag
ggcggcaagatatccattgcggtcgataaaatctcgttcacgatccatcgcggcgagtgc
gtcgcgctggttggtgaatccggctccgggaagtccgtcagcgcactgtcggtactgaag
ctactgccctatccaacggcatctcacccctcgggcagcatcaaattcaacgggcgcgat
ctgctgccgctcgacgagaatgaaatgcgcggcgtgcgcggcaacgacatctcgatcatt
ttccaggagccgatgacgtcgctcaatccgctccataccatcgaggaccagatcggcgag
gcgctgctgctgcacggcggcctgcgcggcaaggctgcgcgcgcacgaacgctggagctt
ctgacgcaggtcggcattcccgatccggagacgaggcttggcgcgtatccgcatcaattg
tccggcgggcagcgccagcgcatcatgatcgcgatggcgctcgccaacgagccggacctc
ctgatcgcggacgagccgaccacggcgctcgatgtcaccgtgcaggcgcaaattctcaag
ctgctcgccgatattcgtgcgcggctcggcatgagccttctcttcatcacgcacgatctc
ggcatcgtgcggcgcatcgccgatcgcgtctgcgtcatgcacaacggcaagatcgtcgag
caggggccggtcgagcaagtgttcaccgcgcctcagcacgattacaccaaagcgctgctg
gccgccgagccgaagcccgatcctgcgccgccgcgtcccgatgagtcggtggtgatgcag
gcggacgatctcaaggtctggtttccgatcaagcgcgggctgctgcgcaagaccgtcggc
cacgtcaaggcggtcgatggcgtatcgctcgcggtgcgcaagggcgagacgctgggagta
gtgggggagtccggttcgggcaagaccacgcttggtctggcgctgttgcggctgatttcc
tcggaaggccccatcgtatttctcggcaagcccattcagggactgcgcttcaaggagatg
cggccgttccggcgcgacatgcagatcgtgtttcaggacccgtatggcgcgctcagcccc
cgcatgtcggtgaatgatatcgtggcggaggggttgagcgtgcatcagccgtcactgtct
gcggccgaacgcgaggcgcgcgtggtgaaggcgctcaccgatgtcggcctcgatccgcag
gtgcggtttcgttatccgcacgagttttcgggcgggcagcgccagcgcatcagcgtggcg
cgagccatcgtgctggagccggatttcgtcgtgctcgacgagccgaccagcgcgctcgac
atgttgtttcaggcgcagatggtcgatctcttgcgcagtttgcaacgcaagcgcgatctc
acctacatgttcatttcccacgatctgcgcgtggtggcctcgctcgctagtcatctgatc
gtgatgcgtcagggcaaggtggtggaagaaggcgaagccaccacgctgttcaaaaatccg
aagacggattacacccgcgcgctgttcgcggcggcgttcaatatcgaggccgatgcgacg
attgcgccggaggcgtga
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