KEGG   Afipia carboxydohydrogena: AFIC_000639
Entry
AFIC_000639       CDS       T08963                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pcax  Afipia carboxydohydrogena
Pathway
pcax02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcax00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AFIC_000639
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pcax02022]
    AFIC_000639
Two-component system [BR:pcax02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   AFIC_000639
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 Mg_chelatase AAA_5 AAA_16 FleQ AAA TadZ_N AAA_2
Other DBs
NCBI-ProteinID: WEF52170
UniProt: A0ABY8BU28
LinkDB
Position
670617..671975
AA seq 452 aa
MPETNQVIFVDDEAAMRESMKQWLALADINATILSSAEDARAIIDRQFSGVVLTDVQLKK
MSGLDLLQECLAIDRDIPVVLLTGHGDVAMAVDAMKQGAYDFLEKPFDPDRLIGTVRRAC
EMRQLVLENRRLRLDATFGNRIERRLVGISPAIRQLRADILELAATPLNVVIRGETGTGK
ELVARCLHEFGPRSEHPFVAVNCGAIPETMFESEFFGHEQGAFTGAVGKRIGRLEYAHKG
TLFLDEIESMPPALQVKVLRAFQEKAFERLGSHKSIPFDARIVVAAKVDLSEAVKEGNFR
EDLYYRLNVSELTIPPLRARLQDIGLLFEHFVAETAAAQNRKSREITAVDLTSLLSHTWP
GNVRELKNVAERFALGLSVGGKPAGAVVAGGQALPQSLANLVADFERGVIEKALLASEGN
VAKVLEMLDIPRRTLNEKMTRYAIERKDYCRP
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcctgagaccaatcaagtcattttcgtcgatgatgaagccgccatgcgcgaatccatg
aagcaatggctggcgctcgccgatatcaacgccaccatcctttcatcggcggaagatgcg
cgcgccatcatcgaccggcaattttccggagtcgtgctcacggacgttcagttgaagaag
atgagcgggctcgatctgcttcaggaatgtcttgcgatcgatcgcgatatcccggtggtg
ctgctgaccggccacggcgacgtggcgatggcggtcgatgcgatgaagcagggcgcttac
gactttcttgaaaagccgttcgatccggatcggctgatcggcacggtgcggcgggcctgc
gagatgcgccagctcgtgctggagaacaggcgcctgcggctggacgcgacattcggcaac
cggatcgaacggcggctggtgggtatctcgccggcaatccgccagcttcgcgccgatatc
ctcgaacttgccgcgacgccgctcaatgtcgtcattcgcggcgaaaccggcacgggcaag
gagcttgtcgccagatgtttgcatgagttcgggccgcgaagcgaacatcccttcgtggcg
gtgaactgcggcgctattcccgagaccatgttcgagagcgagttcttcggtcacgagcag
ggcgctttcaccggcgcggtcggcaagcggatcggccggctggaatacgcgcacaagggc
acgctgtttctcgacgagatcgaaagcatgccgcctgcgttgcaggtcaaggtgctgcgc
gcgtttcaggaaaaggccttcgagcggctcggctcgcacaaatcgatcccgttcgacgcg
cggatcgtggttgcggcaaaggtcgatctgtccgaggcggtgaaggaaggcaatttccgg
gaagatctctattaccggctcaacgtctccgaactgacgatcccgccgctgcgcgcgcgg
ctacaggacattggccttctgttcgagcatttcgtcgccgaaaccgcggctgcgcaaaac
cgcaaaagccgggagatcaccgccgtcgatctcaccagtctgctgagccatacgtggccc
ggcaacgtgcgcgaactgaagaacgtcgccgaacgcttcgcgctcgggctgagcgtcggg
ggcaagcccgcgggcgcggtggttgcgggcggacaggcgctgccgcagtcgctcgccaat
ctggtcgccgacttcgagcgcggcgtcatcgaaaaagcgttgctcgcaagcgagggtaat
gtcgcgaaagtcctcgaaatgctcgatatcccgcgccgtacgctgaacgagaagatgacg
cgctacgcgatcgagcggaaggattattgccgtccgtga

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