Afipia carboxydohydrogena: AFIC_000735
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Entry
AFIC_000735 CDS
T08963
Name
(GenBank) sensor domain-containing diguanylate cyclase
Organism
pcax
Afipia carboxydohydrogena
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
dCache_1_like
dCache_1
GGDEF_2
Stimulus_sens_1
OATP
Motif
Other DBs
NCBI-ProteinID:
WEF52257
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Position
773422..774846
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AA seq
474 aa
AA seq
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MSVLATLAFMTICASVLLDIRSGKEELARQSSENLAATIDADLSRNIEIYDLSLRNVVNN
MLELDTQHISLPILHLILFDHAATAKYYGPIRVFDADGNLKLDSSTLHPAQENRADEEYF
KVHRDNRDAGLYIGDPSVYRNTFAVVLSRRITGYDGKFLGVVVGSLRYSYFHDLFGKLTF
NPEDSVTIFRRDGVVMMRQPFDIAVIGKSLSDSGTVRHILETPSGSTKTRSEIDSIERMY
VWRNSERPLVVVVGKSLDSIYGTWWTQTLIIGGLMFVLSIFAIGTTLFLTREISRRAAAE
KRLSQLATTDALTGIDNRRRFDERILDEWRRGWQKLPLSLLMIDADHFKAFNDLFGHQAG
DQLLARIAACVAESAKRPADCAARYGGEEFVLLLPNTDLAGALKLAEEVRDRVVRLSADK
WATTVSVGVACLVPDMAGSPKDLIEAADKALYEAKEQGRNRCVASDAERATEAA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtgcttgcgacgctggccttcatgacgatctgcgccagcgttttgctcgacatc
cgctccggcaaggaggaacttgccagacagtcctccgagaatctggccgcgaccatcgac
gccgatctcagccgcaacatcgagatttatgatctgtcgctgcgcaacgtcgtcaataac
atgctggagctcgatacccagcatatcagcctgccgatcctgcatctgatcctgttcgat
catgcggcgaccgcaaagtattacggcccgatccgggtgttcgatgccgacggtaatctg
aagctcgactccagcacgctgcacccggcgcaggaaaatcgcgccgacgaggaatatttc
aaggtccatcgcgacaatcgcgatgccggcctctatatcggcgatccctcggtctaccgg
aatacattcgcggtggtgttgagccgccgcatcaccggatatgacgggaaattcctcggc
gtcgtcgtcggctcgctgcgctacagttattttcatgacctgttcggcaagctgacattc
aacccggaagacagcgtcaccattttccggcgcgacggtgtcgtgatgatgcgccagccg
ttcgacatagcggtgatcggcaagagtctcagcgacagtggcaccgtccgccacattctc
gaaacgccgagcggatcgacgaagacacgcagcgaaatcgattccatcgagcgaatgtat
gtctggcggaacagcgagcgcccgcttgtcgtggtggttggaaaatcgctggatagtatc
tacggcacatggtggacgcaaacgctgatcatcggcggcctgatgttcgttctctcgatc
ttcgccatcggcacgacgctctttctcactcgcgagatttcgcggcgtgcggccgccgag
aaacgtctgtcgcaacttgcgaccaccgacgcgctgaccggcatcgacaaccgccgcagg
ttcgacgagcgaattctcgatgaatggcggcgcggctggcagaaattgcccttgtcgctc
ctgatgatcgatgccgatcatttcaaggcgttcaacgatctgttcggtcatcaggccgga
gatcaactgctggcgcggatcgcggcatgcgtcgcggaatccgccaagcgtcccgcagac
tgcgccgcgcgttatggcggcgaggagttcgtgctgctgctgccgaataccgatcttgcc
ggcgcgctcaagctcgccgaggaagtgcgcgatcgcgtcgtgcgcctgtcggccgataaa
tgggcgacaacggtttcggtcggggtcgcctgcctcgttcccgatatggcgggttcaccg
aaggatctgatcgaggcggcggacaaggcgctgtatgaagccaaggagcagggccgcaac
cgctgcgtggcgagcgacgcggagagggcgacggaagccgcctga
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