Pseudomonas carboxydohydrogena: AFIC_000947
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Entry
AFIC_000947 CDS
T08963
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00071
Fatty acid degradation
pcax00280
Valine, leucine and isoleucine degradation
pcax00310
Lysine degradation
pcax00362
Benzoate degradation
pcax00380
Tryptophan metabolism
pcax00410
beta-Alanine metabolism
pcax00640
Propanoate metabolism
pcax00650
Butanoate metabolism
pcax00907
Pinene, camphor and geraniol degradation
pcax00930
Caprolactam degradation
pcax01100
Metabolic pathways
pcax01110
Biosynthesis of secondary metabolites
pcax01120
Microbial metabolism in diverse environments
pcax01200
Carbon metabolism
pcax01212
Fatty acid metabolism
Module
pcax_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AFIC_000947
00650 Butanoate metabolism
AFIC_000947
09103 Lipid metabolism
00071 Fatty acid degradation
AFIC_000947
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AFIC_000947
00310 Lysine degradation
AFIC_000947
00380 Tryptophan metabolism
AFIC_000947
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AFIC_000947
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AFIC_000947
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AFIC_000947
00930 Caprolactam degradation
AFIC_000947
Enzymes [BR:
pcax01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AFIC_000947
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AFIC_000947
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AFIC_000947
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
Methyltransf_31
DAO
ApbA
Pyr_redox_2
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
Sacchrp_dh_NADP
Pyr_redox
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
WEF52459
LinkDB
All DBs
Position
992238..994319
Genome browser
AA seq
693 aa
AA seq
DB search
MDSKILDAMKDHVLELGPQPSSGPYRHFKLTRDEDGIAWLLFDREGASANTLSTEVLEEF
SQILTALESERPAGLVIRSAKRSGFIAGADINEFRGLSDPALVEQQLGRGHEILDRLENL
KMPTVAVIHGFCLGGGLEVVLACNMRIAIDGARFGFPEVLLGLHPGFGGTARSTHLFSPV
EAMTMMLTGKTVEARKAKSLGLIDAVTQERHVRGAVKDAIFGRLKRNRSMLPKVMNIGPV
RGILASRMRSETSMKAPQENYPAPYALIDLWEKYGGNRAAMLSAEKPSFAKLMVTPTAQN
LIRVFFLRDEMKKLAGGKSAIKHVHVIGAGAMGGDIASWCAHQGLRVTLADMQPAAIAGA
MKRASDLFSKITRSRIGQRDELDRLIPDMTGEGAKHADLIIEAVPEKLQLKQSIYAGLEK
VMKPEAILATNTSSIPLEELRASLQRPERLLGIHFFNPVSRLQLVEVISHDQVDREALAN
AMKFVGGIDRLPLPVKSSPGFLVNRALMPYLMEALLMLNEKVDKLTIDEAAEKFGMPMGP
IELADQVGLDICLAVGDELRAKLGDSIPAAPEWLREKVAKGELGRKTGRGFYEWKDGRVQ
KGHAHVHPTPDMTDRLVLPMSNVCVACLREGIVDNPDTVDGAMIFGTGYAPFRGGPLNYA
RERGPENVANALSALAAKYGERFKPDAGWATFR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaaaatcctcgatgcgatgaaggaccacgtcctcgaactcggcccccagccg
tcgtccggaccctatcgccatttcaagctgacgcgcgacgaagacggcatcgcctggctg
ttgttcgaccgcgagggcgccagcgccaacacgctctcgaccgaagtgctggaggagttt
tcgcaaatcctcacggcgctggagagcgagcgtcccgccggactcgtcatccgctcggcg
aagcgttcgggtttcatcgcgggcgcggatatcaacgagtttcgcggcctgtccgatccg
gctcttgtcgagcagcaactcggccgtggtcacgaaattctcgaccggctggaaaatctc
aagatgccgacggtggcggtcatccacggcttctgtctgggtggcgggctggaagtcgtg
cttgcctgcaacatgcggatcgcgatcgacggcgcgcgctttggttttcccgaggtgctg
ctcggcctgcatccgggatttggcggcacggcgcgttcgacgcatctgttcagtccggtc
gaagccatgaccatgatgctgacgggcaagaccgtcgaggcgcgcaaggcgaagtcgctc
ggtcttatcgatgcggtgacgcaggagcgtcatgtacgcggcgcggtgaaggatgcgatc
ttcggccgcctgaagcgcaatcgttcgatgttgcccaaggtgatgaacatcggtccggtg
cgcggaattttggcctcgcggatgcgctccgagacgagcatgaaggcgccgcaggaaaat
tatccggcgccttacgcgctgattgatctgtgggaaaagtatggcggcaaccgcgcggcc
atgctgtcggcggaaaagccgtccttcgccaaattgatggtgacgccgaccgcgcaaaat
ctcatccgcgtgttcttcctgcgtgacgagatgaagaagctcgcgggcggcaagagcgcc
atcaagcatgttcatgtgatcggtgccggtgcgatgggtggcgacatcgcctcgtggtgc
gcgcatcagggattgcgcgtcacgctggccgacatgcagcccgctgcgatcgcgggcgcc
atgaagcgtgcctcggatctgttttcaaagatcacccgcagccgcatcggccagcgtgac
gaactggatcgcctgattccggacatgacgggcgagggtgcgaagcacgccgacctcatc
atcgaggcggtgccggaaaaattgcagctcaagcagtcgatttatgcggggcttgagaag
gtgatgaagccggaggcgattctggcgaccaacacctccagcattccgctggaggaactg
cgcgcctcgttgcagcgacccgagcggctgctcggcatccatttcttcaatccggtgtcg
cggctgcaactcgtcgaggtcatcagtcacgatcaggtggaccgcgaggcgctcgccaac
gccatgaagttcgtcggcggcatcgatcgcctgccgctgccggtgaaaagctcgccgggc
tttctcgtcaaccgcgcactgatgccgtacctaatggaagcactgctgatgctcaacgag
aaggtggacaagctcaccatcgacgaggcggcggagaaattcggcatgccgatgggaccg
atcgaactggccgatcaggtcggtctcgatatctgtctcgcggtcggcgacgagttgcgc
gccaagttaggcgattccatccccgccgcgccggaatggttgcgcgagaaggtcgccaag
ggcgaactcggccgcaagaccggacgcgggttctatgagtggaaggacggccgggtgcag
aagggacatgcgcatgtccatccgacgccggacatgaccgaccgtctggtgctgccgatg
tcgaatgtctgcgtcgcgtgcctgcgcgagggcatcgtcgataatccggatacggtggac
ggcgcgatgatcttcggcaccggctatgcgccgttccgtggcgggccgctgaattacgcg
cgcgagcgcgggcccgagaatgtcgccaatgcgctttcggcgctggcggcgaaatatggc
gaacgcttcaagccggatgccggctgggcaacattccgctga
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