Pseudomonas carboxydohydrogena: AFIC_000962
Help
Entry
AFIC_000962 CDS
T08963
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00300
Lysine biosynthesis
pcax00550
Peptidoglycan biosynthesis
pcax01100
Metabolic pathways
pcax01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AFIC_000962
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFIC_000962
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AFIC_000962
Enzymes [BR:
pcax01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
AFIC_000962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WEF52473
LinkDB
All DBs
Position
1008820..1010256
Genome browser
AA seq
478 aa
AA seq
DB search
MTGQLWTIAAMAEAMKAERSGPLPEGVTGISIDSRTIAPGEAYFAILGDVHDGHAFVEAA
LKNGGGVAVVGQSHRDKFADGLPLLVVPDVLAGLADLAKASRARSHAKIVAVTGSVGKTS
TKEALRTVLQTQGETHTSAASFNNHWGVPLSLARCPSSAQFAVFEIGMNHAGEIEPLVKL
VRPHLAIITTVEPVHLEFFSGIEAIADAKAEIFTGLEPDGVAILNIDNPQFARLRDKAKA
GGVSRIVTFGENAKADARLLDVALHGECSAVHADLLDHDVTYKVGVPGRHMAMNSLAVLA
AATLAGADLALSALALSEFRPAAGRGVRQTLELPGGAVTLIDESYNANPASMTAAMSVLG
QTGIGPRGRRIAVLGDMLELGPKGAELHAGLAAPVAANKVDLVYCCGPLMHALWDSLPSA
KKGGYAEDSAKLESQLVAGIRAGDAIMVKGSLGSRMKLIVTALEKNFPSGVDADDLTV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacagctctggacgattgccgcgatggcggaggcgatgaaggcggagcgtagc
ggcccgctgccggaaggcgtgaccggcatctctatcgacagccgcaccatcgcgccgggc
gaggcgtatttcgcgattctgggcgacgtgcatgacggccacgcctttgtcgaggcggcg
ctgaagaacggtggcggcgttgccgtggtcgggcaatcgcatcgcgacaaattcgcggat
ggtctgccgctgctggtagtgccggacgtgctggcgggccttgccgatctggcgaaggcg
tcgcgtgcgcgctcgcatgcgaagatcgtcgccgtcaccggttcggtcggcaagacctcg
accaaggaggcgctgcgcacggtgttgcagacgcagggcgaaactcacacctcggctgcg
tccttcaacaatcactggggcgtgccgctgtcgctggcgcgttgtccgtcgagcgcgcag
ttcgcggtcttcgagatcggcatgaaccatgcgggcgaaatcgagccgctggtgaaactg
gtgcgcccgcatctggcgatcatcaccacggtggagccggtgcatctcgaattcttttcc
ggcatcgaggcgattgccgatgccaaggcggaaatcttcaccggacttgagccggatggt
gtcgccattctcaatatcgacaatccgcagtttgcgcgcctgcgggacaaggcgaaggcc
ggtggcgtctcccgtatcgtgacgttcggggagaatgcgaaagcagatgcgcgcctgctt
gacgttgcgcttcatggcgagtgttccgccgtccatgccgatctgctcgatcatgatgtg
acgtataaggtcggcgtgccgggccggcacatggcgatgaattcgctcgcggtgctcgcg
gcggccacactggctggggccgatctcgcgctgtcggcgctcgcgctgtcggaattccgg
cccgccgcgggacggggcgtccgccagacgctcgaacttccgggcggggcggtgacgctg
atcgacgaaagctacaatgccaatccggcttcgatgacggcggccatgagcgtgctgggt
cagaccgggatcggcccgcgaggccgccggatcgcggtgctgggcgacatgctggagttg
ggtccgaagggtgcggaattgcacgcgggcctcgccgcgcccgtcgcggccaacaaggta
gatttggtctattgttgcgggcctttgatgcatgccttgtgggattctcttccctcggcg
aaaaaggggggctatgccgaagactcggcgaagctcgaatcgcagctcgtcgcgggaatt
cgcgcgggcgacgcgatcatggtcaagggatcgctcggctcgcgcatgaaactgattgtg
accgcgctcgagaagaattttccgagcggcgtggatgctgacgatcttacagtatag
DBGET
integrated database retrieval system
