Pseudomonas carboxydohydrogena: AFIC_001012
Help
Entry
AFIC_001012 CDS
T08963
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AFIC_001012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_001012
Transporters [BR:
pcax02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AFIC_001012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
DUF4795
CydS
Motif
Other DBs
NCBI-ProteinID:
WEF52522
LinkDB
All DBs
Position
1068009..1069013
Genome browser
AA seq
334 aa
AA seq
DB search
MRKFIVAAASIAAAFMAGPVNAQTPPIVIKFSHVVAPETPKGKGAEKFKELAEKYTSGKV
KVEVYPNSQLYKDKEEVEALQLGAVQMLAPSLAKFGPLGVREFEVFDIPYIMPDKAALNR
VTHGEVGKKLLAKLEPKGIKGLAFWDNGFKIMSANKPLHKPEDFRGLKMRIQSSKVLEAQ
MRALGSIPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMNEVQKHATLSNHGYLGYAVI
VNKKFWDGLPEDVRGQLEKAMADATTYANDIAQKENDDALAAMQKAGTTTFYKLTPEEVA
AWRKVLDPVADEVGNRVGKDLIAEFRKEAASSGK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatttattgtcgccgcagcttcgattgccgccgccttcatggccgggccggtc
aatgcgcagacgccgccgatcgtcatcaagttcagtcacgtcgtcgctcccgaaactccg
aagggcaagggtgcggagaaattcaaggagcttgccgagaaatacaccagcggcaaggtc
aaggtcgaagtctatccgaactcgcaactctacaaggacaaggaagaggtcgaggcgctg
caactcggcgcggtgcagatgctggcgccctcgctggcgaaattcggcccccttggcgtg
agggagttcgaggttttcgatattccctacatcatgccggacaaggctgcgctcaatcgc
gtcacgcatggcgaggtcggcaagaagctgctcgcgaagctcgagcccaagggcatcaag
ggactggccttctgggacaacggcttcaagatcatgagcgccaacaagccgcttcacaag
ccggaggattttcgcggcctgaagatgcgtatccagtcctcgaaggtgctcgaggcgcag
atgcgcgcgctgggttcgatcccgcaggtgatggcgttctcggaagtctatcaggcgttg
cagaccggcgttgtggacggcaccgaaaatccgccgtcgaacatgtacacccagaagatg
aacgaggtgcagaagcacgccacgctctcgaaccatggctatctcggctacgccgtgatc
gtgaacaagaagttctgggatggactgccggaggatgttcgcggccagcttgagaaggcg
atggcggacgccaccacctacgccaacgacatcgcccagaaggaaaacgacgacgcactc
gcggcgatgcagaaggccggtaccaccaccttctacaagctgacgccggaagaagtcgcc
gcctggcgcaaggtgctcgatccggtcgctgacgaagtcggcaaccgtgtcggcaaggac
ctgatcgccgagttccgcaaggaagcggcctcatctggaaaatga
DBGET
integrated database retrieval system
