Pseudomonas carboxydohydrogena: AFIC_001141
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Entry
AFIC_001141 CDS
T08963
Name
(GenBank) PAS domain-containing protein
KO
K13587
two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:
2.7.13.3
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AFIC_001141
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcax01001
]
AFIC_001141
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcax02022
]
AFIC_001141
Enzymes [BR:
pcax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
AFIC_001141
Protein kinases [BR:
pcax01001
]
Histidine kinases
Cell cycle family [OT]
AFIC_001141
Two-component system [BR:
pcax02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
AFIC_001141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
HATPase_c
Response_reg
PAS
PAS_9
PAS_8
HisKA
PAS_7
HPTransfase
PAS_10
DUF3040
DUF3995
Motif
Other DBs
NCBI-ProteinID:
WEF52646
LinkDB
All DBs
Position
1185804..1188341
Genome browser
AA seq
845 aa
AA seq
DB search
MKTDLTPGRPDHFARAAEPARRGGSIVLVLIIAVAVIAAAVAFMVLGRSQAQPFILGLIS
LLAMVGLFTLFAFAAGIVRFADQVAENPLMKPMADNAFDGLAVTDARGQIVYYNNAYLAL
TGAASAQDVRPVERVFIGNPDVSEAVFRLLKAAKEGKRQQEEVRVTDAERGARWLRMRVQ
PLGHSRRESRYAVWSVADITRDRERQEDVFQELQHAIEYLDHAPCGFFSVTPNGDLAYVN
ATLSNWLDYDLAEIGSGGLKLTDILSGDGAALLTSITPEPGEVKTEVFDVDLRMRSGKTM
PARLYHKLAFGADGVPGASRTLVINRARDENADPQRAAEVRFMRFFDHTPMAIATVDRDG
QIVRANARFAKLTQGLSAQASANKSIFAVVHERDRGEVTAILGRAAEGQGDISPVEAMLD
GDKDRWGQFFVTSVEHDERDAEVAIVYLLETTEKRQLENQFAQSQKMQAVGQLAGGIAHD
FNNVLSAIMMANDFLLNAHKPTDPSFQDIMQIKQNATRAATLVRQLLAFSRRQTLRPQVL
DLGDALSDLTMLLKRLIGEKVKLDVVHGRDLWPVKVDVSQFEQVVVNLAVNARDAMPEGG
KLTVKTSNVSAQDVARLNVKGMPAADYVRIEVGDTGTGMTAEIVDKIFEPFFSTKEVGKG
TGLGLSTVYGIVKQTGGFIYVDSTPGQGTMFSIYLPRHIVEKDAEAPAPVVETAAKAKPA
DLTGQGTILLVEDEDGLRSLNARGLRSRGYTVIEAENGLDALEALEAEGGVVDLVVSDVV
MPEMDGPTMLAEMRRKNPAVKIIFVSGYAEDAFEKSLPDGEQFAFLPKPFTLSQLVGAVK
ETMDA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagacctgacccccggcaggccggatcatttcgcgcgcgccgccgagcccgca
aggcggggcggcagcatcgtgctcgtcctcatcatcgcggtcgcggtgatcgcggcggcg
gtggccttcatggtgctcgggcgcagccaggcgcagccgttcatcctcgggctgatttcc
ctgctggcgatggtcggcctgttcacgctgttcgccttcgccgccgggatcgtgcggttc
gccgaccaggtcgcggaaaacccgctgatgaagccgatggcggacaacgccttcgacggc
ctcgcggtgaccgacgcgcgcggccagatcgtctattacaacaatgcctatctggccctg
acgggggcagcgagcgcgcaggacgtgcgcccggtcgagcgggtgttcatcggcaatccc
gatgtctcggaggcggtgttccggcttttgaaggcggcaaaggaaggcaagcgccagcaa
gaggaggttcgcgtcaccgatgccgagcgcggcgcgcgctggctgcggatgcgggtgcag
ccgctcggccacagccgccgtgaatcgcgttacgcggtgtggtcggtcgccgacatcacc
cgcgaccgcgagcggcaggaggacgtattccaggaactccagcacgccatcgaatatctc
gaccatgctccgtgcgggttcttctcggtgacgccgaacggcgaccttgcttatgtcaac
gcaacgctgtcgaactggctcgattacgatctggcggaaatcggctccggcggcctgaag
ctcaccgacattttgtccggcgacggcgcggcactcctgacctcgatcacgcccgagccc
ggcgaagtcaaaacggaagtgttcgacgtcgatctgcggatgcgcagcggcaagaccatg
cccgcgcggctctatcacaagctcgccttcggcgcggatggcgtgccgggcgcctcgcgc
acgctggtcatcaaccgcgcccgcgacgagaatgccgatccgcagcgcgccgccgaagtg
cgcttcatgcgcttcttcgaccatacgccgatggcgatcgccacggtggatcgcgacggc
cagatcgtccgcgccaatgcgcggttcgccaaactcacgcagggcctgtcggcgcaggcg
agcgccaacaagtcgatcttcgcggtggtgcacgaacgcgaccggggcgaagtgacggcc
attctcggccgcgccgccgaagggcagggcgacatttcccccgtcgaggcgatgctcgac
ggcgacaaggaccgctggggccagtttttcgttacctcggtcgagcacgacgagcgcgac
gcggaagtcgccatcgtctacctgctggagactaccgagaagcggcaactggaaaaccag
ttcgcgcagtcgcagaagatgcaggcggtggggcagctcgccggcggcatcgcccacgac
ttcaacaacgtgctgtccgccatcatgatggcgaacgatttcctgctgaacgcgcacaag
ccgaccgacccgtcgttccaggacatcatgcagatcaagcagaacgccacgcgcgccgcg
acgctggtgcggcagttgctggcattctcgcgccgccagacgctgcgtccgcaggtgctc
gacctcggcgacgccttgtccgacctcaccatgctgctcaagcgcctgatcggcgagaag
gtgaagctcgatgtcgtccacggccgcgatctgtggccggtgaaggtggacgtctcgcaa
ttcgagcaggtcgtcgtcaacctcgcggtgaatgcgcgcgacgcgatgccggagggcggc
aagctcacggtcaagaccagcaacgtgtccgcgcaggatgtcgcgcggctgaacgtgaag
ggcatgcccgcggcggactacgtccgcatcgaggtcggcgacaccggcaccggcatgacg
gcggagatcgtggacaagatcttcgagccgttcttctcgaccaaggaagtcggcaagggc
actggcctcgggctttccaccgtctacggcatcgtcaagcagaccggcggcttcatctat
gtcgactcgacgcccggccagggcacgatgttctcgatctatctgccgcgccacatcgtc
gagaaggacgcggaagcgcccgcgcctgtcgttgagacggccgcgaaggccaagcccgcc
gacttgaccgggcagggcaccatccttctggtcgaggacgaggacggtctgcgctcgctg
aatgcgcgcggcctgcgctcgcgcggctacaccgtgatcgaggccgagaacggccttgat
gcgctggaagcccttgaggcggaaggcggcgtggtcgatctcgtcgtctccgacgtggtg
atgccggaaatggacggcccgaccatgctggcggagatgcgccggaagaacccggcggtg
aagatcatcttcgtgtccggctatgccgaggatgctttcgagaaaagcctgccggacggc
gagcaattcgccttcctgcccaagcctttcacgctcagccagcttgtcggcgcggtgaaa
gagacgatggacgcctga
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