Pseudomonas carboxydohydrogena: AFIC_001172
Help
Entry
AFIC_001172 CDS
T08963
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00260
Glycine, serine and threonine metabolism
pcax00630
Glyoxylate and dicarboxylate metabolism
pcax00670
One carbon pool by folate
pcax00785
Lipoic acid metabolism
pcax01100
Metabolic pathways
pcax01110
Biosynthesis of secondary metabolites
pcax01200
Carbon metabolism
Module
pcax_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AFIC_001172 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AFIC_001172 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AFIC_001172 (gcvP)
00670 One carbon pool by folate
AFIC_001172 (gcvP)
Enzymes [BR:
pcax01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AFIC_001172 (gcvP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WEF52676
LinkDB
All DBs
Position
complement(1212247..1215099)
Genome browser
AA seq
950 aa
AA seq
DB search
MTMHRPSNEPAATFARRHIGPSPRDIEAMLETIGASSLDALMGETLPANIRLNRPLDLPP
ALSEADALAHMRDLAARNEVFTSLIGQGYSGTQLPTVILRNILENPAWYTAYTPYQPEIS
QGRLEALFNFQTMICDLTGLDVANASLLDEATAAAEAMALAERSSTTKSRAFFIDRNVHP
QTLAVLRTRAEPLGWSLIVGDPAHDLDSADVFGALLQYPGTDGAIHDFRPAIAALHAKGG
IAIVAADILALTLLASPGELGADIAIGSTQRFGVPMGYGGPHAAYMAAKDALKRALPGRL
VGLSVDSRGQPAYRLALQTREQHIRREKATSNICTAQVLLAIISSMYAVYHGPEGLTHIA
RTVHRRAATLAAGLRRLGFAPTNGGFFDTVTVKAEGAQRADILSRAQTERINPRIGKDTI
GIALDETTTPAIVEAVWRAFGGALDYAQVERETHDALPSALLRTGTFLTHPVFHAYRSET
ELLRYMRKLSDRDLALDRAMIPLGSCTMKLNATTEMIPLTWPEFGNIHPFAPREQAAGYH
ALFARLEQWLAEITGYDAVSLQPNSGAQGEYAGLLAIRAYHTARGEAKRDVCLIPASAHG
TNPASASMAGMKVVVVACDAHGNVDVADLRKKAEAHADTLAAIMITYPSTHGVFEEAIRE
ICDIVHAHGGQVYLDGANLNAQVGLARPGDYGADVSHLNLHKTFCIPHGGGGPGMGPIGV
KKHLTPFLPSVDLQAGAVSAAPYGSASILTISYLYILMMGSDSLRRATEMAILNANYIAR
RLDTHFPVLYRNHNNRVAHECIIDPRPLKTACGVTVDDIAKRLIDYGFHAPTMSFPVPGT
LMIEPTESESRAELDRFCDAMIAIRREIAEVEDGKFPIDASPLRYAPHTVHDIADDNWQR
PYSRAQGCFPEGSPRQDKYWSPVGRVDNVYGDRNLVCSCPPVSTYAQAAE
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcatcgcccatccaacgagcccgccgccaccttcgcccggcgccacatcggt
ccttcgccgcgtgacatcgaggcaatgctggagacgattggcgcatcgagtctcgacgca
ctgatgggcgaaacgctgccagccaatatccggctcaaccgtccgctcgatcttccgcct
gccctgagcgaagccgacgcgcttgcgcatatgcgcgacctcgccgcgcggaacgaggtt
ttcacttcgctgatcggacagggctattccggcacgcagctccccacggtgatcctgcgc
aatattctcgaaaatccggcctggtacacggcctacacgccctaccagccggaaatcagc
cagggacggctcgaggcgctgttcaacttccagaccatgatctgtgacctcaccgggctc
gatgtcgccaacgcctcgttgctcgacgaagcgaccgccgccgccgaggcgatggcgctg
gccgaacgctcgagcaccacaaagagccgcgcgttcttcatcgaccgcaatgtacatccg
cagacgctcgcggtgctgcgcacgcgcgctgaaccgctgggctggtcgctgatcgtcggc
gatcccgcacatgacctcgatagcgcggacgtgttcggcgcgctgttgcagtatcccggc
acggacggcgcgatccatgatttccgtcccgccatcgcggcacttcacgccaagggcggc
atcgccatcgtcgccgccgacattctggcgctgacgctgctcgcctcgcccggcgaactc
ggcgccgatatcgcaatcggctcaacgcaacgcttcggtgtgccgatgggctatggcgga
ccgcatgccgcctacatggcggcgaaggatgcactcaaacgcgcgctgcccggccgcctt
gtcgggctgtcggtggattcgcgcggacagcccgcctatcgcctcgcgctgcaaacgcgc
gaacagcacatccgccgagagaaggcgacctccaacatctgcaccgcgcaagtgctgctc
gccatcatctcctcgatgtatgcggtctatcacggccccgaaggtctgactcatatcgca
cggaccgtgcaccgccgcgcggcgacgctcgcggccgggctgcgccggcttgggtttgcg
ccgacgaacggcggcttcttcgataccgtgacggtgaaagcggaaggcgcccaacgagcc
gacattctgtcccgcgcgcaaaccgaacgcatcaatccccggatcggcaaggacacgatc
ggcatcgcgctggacgagaccaccacgcccgcgatcgtcgaggcggtgtggcgcgcgttc
ggcggcgcgctcgactacgcacaggtagagcgcgagacgcatgacgcgcttccctccgcg
ctcttgcgcaccggcacgtttctcacccatccggtgttccatgcctatcgctcggagact
gaactgctgcgctatatgcgcaaactctccgaccgcgatctcgcgctcgaccgcgcgatg
atcccgctcggctcctgcaccatgaagctgaacgccaccaccgagatgatcccgctgacg
tggcccgagttcggcaacatccacccgttcgcgccgcgcgagcaggcggcgggttatcac
gcgctgttcgcacggcttgagcaatggctcgcggaaatcaccggctacgacgctgtatcg
ctgcaaccgaattccggcgcgcagggcgaatatgcgggactgctcgcgatccgcgcctat
cacaccgcgcgcggcgaagcgaaacgcgacgtctgcctgatccccgcctccgcgcacggt
accaaccccgcatctgccagcatggctggcatgaaggtggtggtggtggcctgcgacgcg
cacggcaatgtcgatgtcgccgatctgcgcaagaaggccgaggcgcatgccgacacgctc
gccgcgatcatgattacctacccctccacccacggcgtgttcgaggaggcgatccgcgag
atctgcgacatcgtccacgcccatggcggccaggtctacctcgacggcgcgaacctcaac
gcgcaggttggcctcgcccgccccggcgattacggcgccgacgtcagccacctcaacctg
cacaagaccttctgcattccgcatggcggcggtggtcccggcatgggaccgatcggcgtg
aagaagcatcttacgccgttcctgccatccgtggaccttcaggcgggcgcggtcagcgcc
gcgccctacggctcggcctcgatcctcaccatttcctatctctacatcctgatgatgggt
tcggacagcctgcggcgcgccacggaaatggcgatcctcaacgccaactacatcgccagg
cggctggatacgcatttcccggtgctgtatcgcaaccacaacaatcgcgtcgcgcacgag
tgcatcatcgatccgcgcccgctgaagacggcttgcggcgtcaccgtggacgacatcgcc
aaacggttgatcgattacggcttccatgccccgaccatgagcttcccggtgccgggcacg
ctgatgatcgaaccgaccgaatccgaatcgagggcggagctggatcgcttctgcgacgcg
atgatcgcgatccgccgcgagatcgccgaggtggaagacggcaagtttccgatcgatgcc
tcgccgctgcgttacgcgccgcacaccgtgcacgatatcgccgacgacaactggcaacgg
ccctactcgcgcgcgcagggctgcttccccgagggcagcccacggcaggacaagtactgg
tcgccggtcggccgcgtcgacaatgtctacggcgaccgcaacctcgtgtgctcctgcccg
ccggtcagcacttacgcgcaggcggcggagtag
DBGET
integrated database retrieval system
