Afipia carboxydohydrogena: AFIC_001276
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Entry
AFIC_001276 CDS
T08963
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AFIC_001276 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcax01007
]
AFIC_001276 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcax03016
]
AFIC_001276 (thrS)
Enzymes [BR:
pcax01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
AFIC_001276 (thrS)
Amino acid related enzymes [BR:
pcax01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
AFIC_001276 (thrS)
Transfer RNA biogenesis [BR:
pcax03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AFIC_001276 (thrS)
Prokaryotic type
AFIC_001276 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-ProteinID:
WEF52778
LinkDB
All DBs
Position
complement(1307911..1309956)
Genome browser
AA seq
681 aa
AA seq
DB search
MTDKEAPASGFQFGLANLKPAEHPDKIAVTFPDGATREFPKNTTGFEIAKGISPSLAKRT
VAMALDGIVSDLGDPIEHDAKIEFINREDPRALELIRHDAAHVLAEAVQALWPGTQVTIG
PVIDNGFYYDFFRNEPFTPEDFAAIEKKMREIIAKDAPFTKEVWTRDDTKKVFRDKGENF
KVELVDAIPGDQSIKIYKQGEWFDLCRGPHMTSTGKVGNAFKLMKVAGAYWRGDSNNPML
TRIYGTAFAKQQDLDDYLKQLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWTLFQ
AIIAYMRRRLAADYDEVNAPQMLDKSLWETSGHWEWYRENMFAAQSAGDEAEDKRWFAIK
PMNCPGHVLIFKHGLKSYRELPIRLAEFGVVHRYEPSGAMHGLMRVRGFTQDDAHIFCTE
QQLADECLKINDLILSTYEDFGFEGELTVKLSTRPEKRVGTDAAWDHAERVMTEVLEQIK
AKSGNRIKTSINPGEGAFYGPKFEYVLRDAIGREWQCGTTQVDFNLPERFGAFYIDEHSN
KVAPVMVHRAICGSLERFTGILIEHFAGHFPLWLAPVQAVITTITSDGDDYAREVFEACR
AAGLRVDIDLRNEKINYKVREHSLAKVPALLVVGKKEAETRAVSIRRLGREGQTVLPLDE
ALKALTAEATPPDVKRVKGLA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataaagaagcgcccgcgtccggattccagttcggcctcgccaacctcaagccc
gccgaacatcccgacaaaatcgccgtcaccttccctgatggcgcgacgcgcgaatttccc
aagaacaccaccggcttcgagatcgccaagggcatctcgccctcgctcgccaaacgcacg
gtggcgatggcgctcgacggcattgtgtccgacctcggcgacccgatcgagcacgatgcg
aaaatcgaattcatcaaccgcgaagacccgcgcgctctggagctgatccggcacgatgcc
gcgcatgtgctggccgaagccgtgcaggcgctatggccgggcacgcaggtcaccatcggc
ccggtgatcgacaacggcttctattacgatttcttccgcaacgagccgttcacgccggag
gacttcgccgccatcgagaagaagatgcgcgagatcatcgccaaggacgcgcccttcacc
aaggaagtgtggacgcgcgacgacaccaagaaggtgttccgcgacaagggcgagaatttc
aaggtcgaactggtcgatgccattcccggagatcagtcgatcaagatctacaagcagggc
gaatggttcgacctctgccgtggcccgcacatgacctcgaccggcaaggtcggcaacgcc
ttcaagctgatgaaggtcgcgggcgcctactggcgcggcgattccaacaatccgatgctg
acgcgcatctacggcaccgccttcgccaagcagcaggatctcgacgattacctcaagcag
cttgaggaagccgagaagcgtgaccatcgccgtctcggccgcgagatggacctgttccac
tttcaggaggaaggtcccggcgtcgtgttctggcatgcgaagggctggacgctgtttcag
gcgatcatcgcctacatgcgccgccgcctggccgccgattacgacgaggtcaacgcaccg
cagatgctcgacaagtcgctgtgggagacctcaggccactgggaatggtatcgcgagaac
atgttcgcggcgcagtcggctggcgacgaagccgaggacaaacgctggttcgcgatcaag
ccgatgaactgccccggccatgtgctgatcttcaagcatggcctcaagagctatcgcgaa
ctgccgatccgcctcgcggaattcggcgtcgtgcatcgctacgagccgtcgggcgcgatg
cacggactgatgcgcgtgcgcggtttcacgcaggacgacgcgcatatcttctgcaccgaa
caacaactcgcggacgaatgcctcaagatcaacgatctgatcctctcaacttatgaggat
ttcggcttcgagggcgaattgacggtgaagctctcgacgcgccccgagaagcgcgtcggc
acggatgcagcgtgggatcacgccgaacgcgtgatgaccgaggtgctggagcagatcaag
gcgaagtccggcaaccgcatcaagacctcgatcaatccgggcgaaggcgcattctacggc
ccgaagttcgaatatgtgttgcgcgacgccatcggccgcgaatggcagtgcggcaccacg
caggtggacttcaacctgccggaacggttcggcgcgttctacatcgacgagcattccaac
aaggtcgctccggtgatggtgcatcgcgcgatctgcggttcgctggaacgcttcaccggc
atcctgatcgagcacttcgccggtcacttcccgctctggctcgcgccggtgcaggcggtc
atcaccaccatcacctcggatggcgacgattacgcccgcgaggtgttcgaagcctgccgt
gccgctggcttgcgcgtcgacatcgatctgcgcaacgagaagatcaactacaaggtgcgc
gagcattcgctggccaaggtcccggcccttctcgtcgtcggcaagaaggaagccgagacg
cgcgccgtctcgatccgccgcctcggccgcgagggccagaccgtgctgccgctcgacgag
gctcttaaggcgctgaccgccgaggcgacaccgccggacgtgaagcgagtgaaaggcctt
gcttaa
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