Afipia carboxydohydrogena: AFIC_001488
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Entry
AFIC_001488 CDS
T08963
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax00260
Glycine, serine and threonine metabolism
pcax00460
Cyanoamino acid metabolism
pcax00630
Glyoxylate and dicarboxylate metabolism
pcax00670
One carbon pool by folate
pcax00680
Methane metabolism
pcax01100
Metabolic pathways
pcax01110
Biosynthesis of secondary metabolites
pcax01120
Microbial metabolism in diverse environments
pcax01200
Carbon metabolism
pcax01230
Biosynthesis of amino acids
pcax01240
Biosynthesis of cofactors
pcax04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AFIC_001488
09102 Energy metabolism
00680 Methane metabolism
AFIC_001488
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AFIC_001488
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AFIC_001488
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AFIC_001488
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AFIC_001488
Enzymes [BR:
pcax01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AFIC_001488
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Poly_A_pol_cat
Motif
Other DBs
NCBI-ProteinID:
WEF52974
UniProt:
A0ABY8BSL7
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All DBs
Position
1505656..1506957
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AA seq
433 aa
AA seq
DB search
MSSSAKTASAPNTFFTATLNEADSEIADAIKGELGRQQHEIELIASENIVSRAVLEAQGS
VLTNKYAEGYPAKRYYGGCEWVDVVENLAIERAKKLFGAQFANVQPNSGSQMNQAVFLAL
LQPGDTFMGLDLAAGGHLTHGAPVNMSGKWFTPKHYTVRREDHLIDMDAVAKQAQEVKPK
LIIAGGSAYSRPWDFKRFREIADSVGAYFMVDMAHFAGLVAGGVHASPVPHAHVTTTTTH
KSLRGPRGGLILTNDEDIAKKINSAIFPGLQGGPLMHVIAAKAVAFKEALQPDFKVYAKN
VVENARALAESLRGHGFEIVSGGTDNHLMLVDLRPKGLKGNISERALVRAGLTCNKNGIP
FDPEKPFVTSGLRLGTPATTTRGFGVAEFKQVASLIAEVLNAVAQSPEGAAPGVEEQVKK
RVRELTDRFPIYS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttccgcgaaaaccgcttccgctcccaatacgtttttcaccgccacgctcaac
gaggccgattccgagatcgccgatgccatcaagggcgaactcggccgtcagcagcatgag
atcgagctgatcgcatccgaaaatatcgtcagccgcgccgtgctcgaggcgcagggttcg
gtgctcaccaacaagtacgcggaaggttatccggccaagcgctattacggcggctgcgag
tgggtcgatgtggtggagaatctcgccatcgagcgcgccaagaagctgttcggcgcgcag
ttcgccaatgtgcagccgaactccggcagccagatgaaccaggcggtgtttctggcgctg
ctgcaacccggcgacaccttcatgggtctcgatctcgccgccggcgggcatctcacccat
ggcgcgccggtcaacatgtccggcaagtggttcacgccgaagcactacaccgtgcggcgc
gaggaccatctgatcgacatggatgcggtggccaagcaggcgcaggaggtgaagccgaaa
ctcatcatcgcgggcggctcggcctattcgcggccgtgggacttcaagcgcttccgcgag
atcgccgacagcgtcggcgcgtatttcatggtggacatggcgcacttcgcgggcctcgtc
gcgggcggggtgcatgcctcgccggtgccgcacgcccacgtcaccaccactaccacgcac
aagtcgctgcgcggtccgcgcggcggcctgatcctcaccaatgacgaggacatcgccaag
aagatcaactcggcgatcttccccggcttgcagggcggtccgctgatgcacgtcatcgcc
gccaaggcggtggccttcaaggaagcgttgcagccggacttcaaggtgtacgcgaagaac
gtcgtcgaaaacgccagggcgcttgcggaatcgctgcgcggccacggcttcgagatcgtc
tcgggcggcaccgacaaccatctgatgctggtcgatcttcggccgaagggcctgaagggc
aacatctcggagcgcgcgctggtgcgcgcgggcctgacctgcaacaagaacggcattccg
ttcgaccccgagaagccgttcgtgacctcgggcctgcgcctcggcacgcctgcgaccacc
acgcgcggtttcggcgtcgccgaattcaagcaggtggcctcattaatcgcggaagttctc
aatgcggtggcgcagtctccggaaggtgccgcgccgggcgtcgaggagcaggtcaagaag
cgggtgcgcgaactgaccgatcgtttcccgatctattcgtaa
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