Afipia carboxydohydrogena: AFIC_001564 Help Entry AFIC_001564       CDS       T08963                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism pcax  Afipia carboxydohydrogena Pathway pcax03018   RNA degradation Brite KEGG Orthology (KO) [BR:pcax00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     AFIC_001564  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pcax03019]     AFIC_001564 Messenger RNA biogenesis [BR:pcax03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      AFIC_001564 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RMMBL RNase_J_C Lactamase_B_2 Lactamase_B Cuticle_1 Motif Other DBs NCBI-ProteinID:  WEF53042 UniProt:  A0ABY8BXS3 LinkDB All DBs Position 1579489..1581159 Genome browser AA seq 556 aa AA seqDB search MARADELSFVPLGGIGEIGMNLSLYGLGKGRQRSWLAVDLGVSFGNEEHLPGIDVVMPDI RFIESEKKNLVGLVLTHAHEDHFGAIIDLWPRLQCPIYATKFSAALFEAKCASERNPPNI PVTVIESGGRIDIGPFNVEFVAVQHSIPESHALAIRTAEGLVIHTGDWKLDPTPLIGEPT NEKRLRELGDEGVLALVGDSTNAVREGRSASEREVALGLAEIIKAAKGRVAVTTFASNVS RMRAVAEAAREADREVVLIGRAMERVAQVARETGYLDGIAPFRGADLYGHFPPNKVLALC TGSQGEPRAALARIANDDHPEVTLNKGDTVIFSSRTIPGNEKAVGAIINGLVSQGIKVIT DRTHMVHVSGHPRRDELRDMISWVRPQLLIPAHGEALHLSEHASLARSCGVPKVLVCRNG DQVRLAPGEPAIVEQVPSGRLYKDGKILEDQNARAVVARRRLAFAGGAFVALALTEQGEL ADDPQVDLVGIPERNAAGELMDELIYDVAVATFDNLPRAKRRDSDAVGEAIRRAVRSAIA EQWGKKTVCVVHVLEV NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt atggcgcgtgctgatgaattgagttttgtgccgctcggtggcatcggcgagatcggcatg aacctgtcgctctacggcctcggcaagggcaggcagcgttcatggctcgcggtcgatctc ggcgtgtcgttcggcaatgaggagcatctgccgggcatcgacgtggtgatgccggatatt cgtttcattgaatccgagaagaagaatctcgtcgggctcgtgctgacccacgcccatgaa gaccatttcggtgcgatcatcgatctgtggccgcgcctgcaatgcccgatctacgccacg aaattttccgccgcgctgttcgaggcgaagtgtgcgagcgagcgcaacccgccgaatatt cctgtcacggtgatcgaatccggcggacgtatcgacatcggccctttcaatgtcgaattc gtcgccgtgcagcattcgattccggaatcccatgcgctggcgatccgcaccgccgaaggg ctggtgattcacaccggcgactggaagctcgatccgacgccgctgatcggcgagccgacc aacgagaaacgcttgcgcgaactcggcgacgagggtgtgctggcgctggtcggcgattcc accaatgccgttcgtgaaggccgctcggcctccgagcgggaagtcgcgctgggcctcgcc gagatcatcaaggccgcgaaggggcgggtggcggtgacgaccttcgcctcgaatgtttcg cggatgcgcgccgtggcggaagccgcgcgcgaggcggatcgtgaagtcgtactgatcggc cgcgcgatggagcgcgtggcgcaggtggcgcgcgagaccggttatctcgacggcatcgcg ccgtttcgcggcgcggacctctacggtcactttccgccgaacaaggtactggcgctgtgc accggcagccagggcgagccgcgcgcggcgctggcgcgcatcgccaatgacgatcatccc gaggtgacgctcaacaagggcgacaccgtgatcttttcctcgcgcaccattccgggcaac gagaaggcggtgggagcgatcatcaacggtctcgtcagtcagggcatcaaggtcatcacc gaccgcacccatatggtccatgtctccggccatccgcgccgcgacgaactgcgcgacatg atctcgtgggtgcggccgcaactcttgatccccgcgcatggtgaggcgttgcatctgtcg gaacatgcgagcctcgcgcggtcctgcggcgtgcctaaagtgctggtgtgcaggaatggc gatcaggttcggctcgcgcccggcgagcccgccatcgtcgaacaggtgccgtccggccgc ctttacaaggacggcaagattctggaggaccagaatgcgcgcgcggtggtggcgcggcgg cggctggcatttgccggtggcgcgttcgtcgcattggcgctgacggagcagggcgaactg gcggacgacccccaggtcgatctggtcggaatccccgagcggaacgcggcgggcgaactg atggatgaactgatctacgacgtcgcggttgcgactttcgacaatctgccgcgcgccaag cggcgcgattccgatgccgtaggtgaagcgatacggcgcgcggtgcgctcggccatcgcc gagcaatggggcaagaagacggtctgcgtcgtccacgttctggaggtctga

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