Pseudomonas carboxydohydrogena: AFIC_001808
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Entry
AFIC_001808 CDS
T08963
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
pcax
Pseudomonas carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcax01011
]
AFIC_001808
Enzymes [BR:
pcax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AFIC_001808
Peptidoglycan biosynthesis and degradation proteins [BR:
pcax01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AFIC_001808
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GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_2
DUF1627
Motif
Other DBs
NCBI-ProteinID:
WEF50276
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All DBs
Position
1856049..1857275
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AA seq
408 aa
AA seq
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MTESDSLSRSALTRRDVVLGAGALALASTSAFANTPPGFDAWRESFRAKALAKGVSSATY
TRVMGRIEPDMSVFAQMGNQPEFKEQLWQYINRRASDWRIRAGKEALRQHGALFTRIEHD
FGVERGTLLALWGVESAYGDPLVQKNHMKPVFPSLAALAWRAPRRKAYWETELINALRIV
ERGWSTPEEMRGSWAGAMGHTQWMPEVWLNVGFDYDHDGRVSPFGKPDDALGSTARYLVN
RGKYHRNQHWGCEVVGGSHAKGDRSYAQWAAAGVTRADGKPFPRPSDMAKLWTPVDGGPS
FLIGPNFFAVRSYNPSMNYALAIVHLGDRILGEPPFRHPFPGSERALTLAEIQEVQTRLT
KAGFNTGGTDGRVGNDTMKAVKNFQTRAGIEPADGYAGLKVLARLRGM
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagagtgattccctttcgcgatccgcactgactcgccgcgacgttgtgctcggc
gcgggcgcgctcgcgcttgcctccacatcagctttcgccaacaccccgccgggcttcgac
gcatggcgggagtcgttccgtgcaaaagcgctcgccaagggcgtctccagcgccacctat
acgcgggtgatgggccggatcgagccggacatgagcgtgttcgcgcagatgggcaaccag
ccggagttcaaggaacagctctggcaatacatcaaccgccgcgcgtccgactggcgcatc
cgcgcgggcaaggaagcgttgcgccagcacggcgcgctgttcacgcggatcgagcacgat
ttcggcgtcgagcgcggcacgctgctggcgctgtggggcgtcgagagcgcctacggcgat
ccgctggtgcagaagaaccatatgaagccggtattcccctcgctcgccgcgctggcgtgg
cgggcgccgcgccgcaaggcgtattgggaaaccgaactcatcaacgcgctgcgtatcgtc
gagcgcggctggagcacgccggaggaaatgcgcggctcgtgggccggtgcgatgggccac
acccaatggatgccggaggtctggctcaatgtcggttttgactatgaccatgacggccgc
gtctcgccgttcggcaagcccgacgacgccctcggctcgacggcgcgttatctcgtcaat
cgcggcaagtatcaccgcaaccagcattggggttgcgaggtcgtcggcggcagtcatgcg
aagggagatcgcagctacgcgcagtgggcggcggcgggtgtgacgcgcgcggacggcaag
ccgtttccgcggcccagcgacatggcgaagctgtggacgccggtcgatggcgggccttca
tttctgatcgggccgaattttttcgcggtgcgcagctacaacccgtcgatgaactacgcg
ctcgccatcgtccacctcggcgaccgcatcctcggcgagccgccgttccggcatcccttc
cccggctccgaacgcgcgctgacgctcgcggaaattcaggaagtgcagacccgcctgacc
aaagccggtttcaacaccggcggcacggatggccgcgtcggcaacgacaccatgaaggct
gtgaagaatttccagacccgcgccgggatcgagccggcagacggctatgcaggactgaag
gtgctggcgcggctgcgcggcatgtaa
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