Afipia carboxydohydrogena: AFIC_001821
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Entry
AFIC_001821 CDS
T08963
Name
(GenBank) DEAD/DEAH box helicase
Organism
pcax
Afipia carboxydohydrogena
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_19
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WEF50289
UniProt:
A0ABY8BJV3
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All DBs
Position
1872108..1873526
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AA seq
472 aa
AA seq
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MSFSNLGLSDKVLAAVAATGYTSPTPIQEQAIPHVLARRDVLGIAQTGTGKTAAFVLPML
TLLEKGRARARMPRTLILEPTRELAAQVKENFDRYGVGQKLNVALLIGGVSFGDQDAKLG
RGVDVLIATPGRLLDHTERGKLLMTGVELLVIDEADRMLDMGFIPDIERICKLVPFTRQT
LFFTATMPTEIRRITETFLHNPMKVEVSKPASTAVTVTQSQISTGKEPHEKRELLRQLLR
DAKDLKNAIIFCNRKREVAVLHKSLQKHGFGAAALHGDMDQSARMAALEQFRKGELPLLV
ASDVAARGLDIPEVSHVFNFDVPHHPDDYVHRIGRTGRAGRLGTAISIVSPLDQKSILAI
EKLIGQSIPHVEGHARTAAVSVESDTATAENGPASRKSRRGGQRSKHRDREKTSAKPAAK
QAPSPKSSARTPAAPPPSLGRIPMAAATQDHVEPGDHSHLPAFLLRPVRARG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttccaatctcggcttgtccgacaaggttctcgccgcagtcgcggccaccggt
tacacctctcctacccccattcaagaacaggccattccccacgttctcgcccggcgcgac
gtgctcggcatcgcccagaccggcaccggcaagacggcggcgttcgtgctgcccatgctg
acgctgcttgaaaaaggccgcgcgcgggcacggatgccgcgcaccctcattctcgaaccg
acgcgcgagctcgcagcgcaggtgaaggagaatttcgaccgctacggcgtcggccagaaa
ctcaacgtcgccctcctgatcggcggcgtctcgttcggcgaccaggacgccaagctcggg
cgcggcgtcgatgtgctgatcgccactccgggccgcctgctcgatcataccgagcgcggc
aagctcctgatgaccggcgtcgaactcctcgtgatcgacgaggccgaccgcatgctggac
atgggcttcattcccgacatcgagcgcatctgcaagctggtgccgttcacgcgccagacc
ctgttcttcaccgcgacgatgcccacggaaatccgccgcatcaccgaaaccttcctgcac
aatccgatgaaggtcgaggtttccaaaccggcctcgaccgccgtcaccgtcacgcagtcc
cagatcagcaccggcaaggagccacacgaaaagcgcgaactgctgcgccagctcctgcgc
gacgccaaggatctgaagaacgcgatcatcttctgcaaccgcaagcgcgaagtcgcggtc
ctgcacaaatcgctgcaaaagcacggcttcggcgccgcagccctgcacggcgacatggac
cagagcgcgcgcatggccgcgctcgaacaattccgcaagggcgaattgccgttgctggtc
gcttccgacgtcgcggcccgtggcctcgatattcccgaagtgagccacgtcttcaatttc
gatgtccctcatcatccggacgattacgttcaccgcatcggccgtaccggccgcgccggc
cgtctcggtaccgcaatctcgatcgtctcgcctctggaccaaaaatcgatcctcgcgatc
gaaaagctgatcgggcaatccatccctcacgtggaaggccacgcgcggaccgcagccgtc
tccgttgaatccgataccgcgaccgcggagaatggcccggcgtcccgcaaatcgcggcgc
ggcggtcagcgctcgaagcaccgcgatcgcgaaaagacctcggccaagcctgccgccaaa
caggctccatcgccgaaatcatcggccaggacgcctgcggccccgccgccgtcactcggc
cggattccgatggctgccgcaacgcaggatcacgtagagcccggcgatcattcacatttg
ccggcgttcctgctgcgtcccgtccgcgcccgtgggtaa
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