Afipia carboxydohydrogena: AFIC_001838
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Entry
AFIC_001838 CDS
T08963
Name
(GenBank) penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax00550
Peptidoglycan biosynthesis
pcax01100
Metabolic pathways
pcax01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFIC_001838
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AFIC_001838
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcax01003
]
AFIC_001838
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcax01011
]
AFIC_001838
Enzymes [BR:
pcax01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
AFIC_001838
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AFIC_001838
Glycosyltransferases [BR:
pcax01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
AFIC_001838
Peptidoglycan biosynthesis and degradation proteins [BR:
pcax01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
AFIC_001838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
WEF50304
UniProt:
A0ABY8BJX1
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All DBs
Position
complement(1892800..1895289)
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AA seq
829 aa
AA seq
DB search
MRLLVRFLGFLFAAGTILFLVGVSAVAGLLWHYSKDLPDYTQLKNYEPPVMTRVHAADGS
LLAEYAKERRLYLPIQAIPKRVINAFLAAEDKNFYEHGGIDFTGMARAALLYAQNYGSNR
RPQGASTITQQVAKNFLLTNEVSFTRKIKEALLAMRIERTYSKEKILELYLNEIYLGLGA
YGIAAASLVYFDKSVNELSIAEAAYLAALPKAPAQLHPVRNHDRAVERRNYVIDRLAENG
WIKPAEAAAARKEPLVVTSRSNATHVFAGEYFAEEVRRDIFERYGEKKLYEGGLSVRATL
DPKLQVIARQAMVKGLVNYDESVGWRGPVTKIDISGDWGIKLAEVKSLSDVSPWRMAVVL
EANDQSARIGFQPGRVLGGAISKARDTGLVTMDGVRWAKAASGPTRYKAPTKVTQVLTPG
DVVYVDPLLGKDGKAVEGQYRLRQIPEVSGGMIVMDPSTGRVLAMSGGFSFDQSQFNRAT
QAYRQPGSSFKPIVYSTALDNGYTPSSIVVDAPIEIDQGSGNVWRPENYSTGKYYGPQTL
RFGLEHSVNNMTVRLAQDIGMPIIGEYAKRFGVYDELPNYLSYALGAGETTVMRMVTAYS
MIANGGKRVKATLIDRIQDRFGHTIYKHDQRECRGCDAPEGWHNQPEPTLIDRREQVLDP
MTAYQITSMMEGVVQRGTATVVREVGKPIAGKTGTTNEEKDAWFVGFSPNVVVGLYIGYD
KPKPLGRGGTGGHLAAPIAKDFLKVALADKPAVPFRVPAGIKLVRVDLKSGMRAGPGDTG
RTILEAFKPGTAPPDNYAAIGMADGNGQVLTVSPDADRAIMRPGTGGLY
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgctggtgcgcttcctggggttcctttttgccgccggaacgatcctgttcctg
gtcggcgtcagcgccgtcgcgggcctgctctggcattattccaaggacctgccggactac
acccagctcaagaactacgagcccccggtgatgacgcgcgttcatgccgccgacggttcg
ctgctggccgaatacgccaaggaacgccggctctatctgccgatccaggcgatccccaag
cgcgtcatcaacgcgttcctcgcggctgaggacaagaatttctacgagcatggcggcatt
gacttcaccggcatggcgcgcgccgcgctcctgtatgcgcagaactacggttcgaaccgc
cgtccgcagggcgcatccaccatcacccagcaggtcgccaagaacttcctgctgacgaac
gaagtctcctttacccgcaagatcaaggaagccttgctcgcgatgcgcatcgagcgcacc
tacagcaaggaaaagatcctcgagctttatctcaacgaaatctatcttggtctcggcgcc
tatggcatcgctgcggcttcgctcgtttacttcgacaagtcggtcaacgagctgtcgatc
gcggaagcggcctatctcgctgccttgccgaaggcgcccgcccagcttcatccggtgcgc
aaccatgatcgcgctgtcgagcgccgcaattacgtaatcgatcgtcttgccgagaatggc
tggatcaagcccgcggaagctgccgccgcgcgcaaggagccgcttgtcgtcaccagccgc
agcaacgcgacgcatgtcttcgcgggcgagtatttcgccgaggaggtccgccgcgacatc
ttcgagcgctacggcgaaaagaagctctatgagggcggcctgtcggtgcgcgccacgctc
gatccgaaattgcaggtgatcgcgcggcaggcgatggtcaagggcctcgtcaattacgac
gagtcggtcggctggcgcgggcctgtcaccaagatcgatatcagcggcgactggggcata
aaactcgccgaggtcaaatcgctgtccgatgtttcgccgtggcgcatggcggtggtgctg
gaggcgaatgaccagtcggcgcgcatcggcttccagccgggccgcgtgctcggcggcgcg
atctccaaggcgcgtgataccggcctcgtgaccatggacggcgtgcgctgggccaaggcg
gcctcggggccgacccgctacaaggcgccgaccaaggtgacgcaagtgctgacgccgggc
gatgtcgtctacgtcgatccgctgcttggcaaggacggcaaggccgtcgaggggcaatac
cggctgcgccagattcccgaagtgtcgggcggcatgatcgtgatggacccgagcaccggc
cgcgtgctggcgatgagcggcggcttctcgttcgaccagagccagttcaaccgcgccacg
caggcctaccggcagcccggctcatccttcaagccgatcgtctattcgaccgcgctggat
aacggctacacgccgtcgagcatcgtggtcgatgcgccgatcgaaatcgatcagggctcg
ggcaatgtgtggcggccggaaaactattcgaccggcaagtattacggcccgcagacgctg
cgtttcggcctcgagcactccgtcaacaacatgacggtgcggcttgcgcaggatatcggc
atgccgatcatcggcgaatacgccaagcgcttcggcgtctatgacgagttgccgaactac
ctgtcctacgcgctcggtgcgggcgagacgaccgtgatgcgcatggtgaccgcgtattcg
atgatcgccaatggcggcaagcgtgtgaaggcgacgctgatcgatcgcatccaggaccgt
ttcggccacaccatctataagcacgaccagcgcgaatgccgtggctgcgatgcgccggaa
ggctggcacaaccagcccgagccgacgctgatcgaccggcgtgagcaggtgctcgatccg
atgacggcctaccagatcacctcgatgatggaaggcgtggtccagcgcggcaccgcgacc
gtcgtgcgcgaggtcggcaagccgatcgcgggcaagaccggcaccaccaacgaggaaaag
gacgcctggttcgtcggcttctcgccgaatgtcgtcgtcggtctgtatatcggctacgac
aagccgaagccgctcggccgtggcggcaccggcggccatctcgccgccccgatcgccaag
gacttcctgaaagtcgcgctggcggacaagcccgcggtgccgttccgtgtgcctgcgggc
atcaagctcgtacgcgtcgatctcaagagcggcatgcgggcggggccgggcgataccggc
cgcaccatcctcgaggccttcaagccgggcaccgcgccgcctgacaattacgcggccatc
ggcatggccgacggtaacgggcaggtactcaccgtgtcgccagacgcggatcgcgcgatc
atgcgcccgggtaccggcggcctttactga
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