KEGG   Pseudomonas carboxydohydrogena: AFIC_001861
Entry
AFIC_001861       CDS       T08963                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pcax  Pseudomonas carboxydohydrogena
Pathway
pcax02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcax00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AFIC_001861
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pcax02022]
    AFIC_001861
Two-component system [BR:pcax02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   AFIC_001861
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 Mg_chelatase FleQ AAA_16 AAA HTH_30 VpsR T2SSE AAA_22 AAA_7 MCM
Other DBs
NCBI-ProteinID: WEF53119
LinkDB
Position
1924936..1926288
AA seq 450 aa
MNASFSVVLLDDDRDLLKATQQTLELAGFQVQAFTAAADALAVLDRHFNGVVVSDIRMPG
IDGLQFFQRLQHVDADIPVILITGHGDISMAVKAIQDGAYDFITKPFATERLAHSVRQAA
EKRQLVMENRALREAAGEAENGLPLIGQTPAMEWLRHTLRQIADTDVDVLVTGETGSGKE
VVATLLHRWSSRRSANNFVALNCSALPESIIESELFGHEQGAFTGAQKRRLGRIQHADGG
TLFLDEIESMPQSVQVQMLRVLEMREVAPLGTNEVRPIDLRIVAASKVDLGDPAQRGNFR
EDLYYRLNVITLSIPPLRERRDDIPMLFGYFTNRAAARFQRAVPDVPASVHRYLRDHQWP
GNVRELSHFAERFVLGLDNETQDNARGRLENILPLPERLELFEASIIREALENHDGDVRR
TIEALGIPRKTFYDKLQRHGIVRSEFSKAN
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgaacgcctctttctccgtcgtcctgctggatgacgaccgcgatcttctgaaggcgacc
cagcagacgctggagcttgccggattccaggttcaggcattcaccgctgcggcggatgcg
cttgccgtgctcgaccggcatttcaatggcgtcgtcgtatccgacatccgcatgccgggc
atcgacgggttgcagttcttccagcgcctgcaacacgtggatgccgacattccggtgatc
ctcatcaccggccacggcgatatttcgatggcggtgaaagctatccaggatggagcctac
gatttcatcaccaagcctttcgccaccgagcggctggcgcacagcgtgcggcaggcggcg
gagaagcgccagttggtgatggaaaaccgcgcgctgcgtgaggccgcaggcgaagccgag
aacggcctgccgctgatcggccagacaccggcgatggaatggttgcgccatacgctgcgc
cagatcgccgataccgatgtcgatgtgctggtgacgggagaaaccggttcgggcaaggaa
gtcgtcgcaacgctgctgcaccgctggagcagccgccgctcagccaacaatttcgtggcc
ctcaattgcagcgccctgccggagagcatcatcgagagcgagctgttcggccacgagcaa
ggcgcattcaccggcgcccagaagcgccggctcgggcgtatccagcatgccgatggcggc
acgctgtttctcgacgaaatcgaaagcatgccgcaatcggttcaggtgcagatgttgcgc
gtgctggaaatgcgcgaggtcgcaccgctcggcaccaatgaagtccgccctatcgacctg
cgtatcgttgccgcttcaaaggtcgatctcggcgatcccgcccagcgcggcaatttccgt
gaggacctttactaccgcctcaacgtcatcacattgtcgatcccgccgctgcgggaacgg
cgcgacgacatcccgatgctgttcggttatttcaccaaccgcgccgccgcgcgcttccag
cgggccgtgcctgacgttccggcttccgtgcatcgctacctgcgcgaccaccagtggccg
ggaaacgtgcgcgagctgtcgcatttcgccgagcgcttcgtgctcggcctcgacaatgaa
acgcaggacaacgccagaggacgcctcgaaaacatattgcctctgcccgaacgcctggag
ctgttcgaggcgtcgatcatccgcgaggcgctcgaaaatcatgacggcgacgtccgccgc
accatcgaagcactcggcatcccgcgcaagaccttctacgacaagctgcaacgtcacggc
atcgtgcgcagcgagttctcgaaagccaattga

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