Afipia carboxydohydrogena: AFIC_001880
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Entry
AFIC_001880 CDS
T08963
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AFIC_001880 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcax01007
]
AFIC_001880 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcax03016
]
AFIC_001880 (aspS)
03029 Mitochondrial biogenesis [BR:
pcax03029
]
AFIC_001880 (aspS)
Enzymes [BR:
pcax01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
AFIC_001880 (aspS)
Amino acid related enzymes [BR:
pcax01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AFIC_001880 (aspS)
Transfer RNA biogenesis [BR:
pcax03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AFIC_001880 (aspS)
Prokaryotic type
Other AARSs
AFIC_001880 (aspS)
Mitochondrial biogenesis [BR:
pcax03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
AFIC_001880 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
WEF50344
LinkDB
All DBs
Position
complement(1947284..1949056)
Genome browser
AA seq
590 aa
AA seq
DB search
MHRYRSHTCGALRESDIDSNVRLSGWCHRIRDHGGLLFIDLRDHYGMTQCVIDPDSKAFK
LAEKLRSEWVVKIDGKVRRRPDGTDNPDLPTGAVEVFIADIEVLGEAAELPLPVFGDLEY
PEEVRLKYRFLDLRREKLHQNIMTRGQIIDSMRARMKKEGFFEFQTPILTASSPEGARDF
LVPSRIHAGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE
MSFVTQDDVFAAMEPVITGVFEDFANGKPVTKNWPRIPFAESLRKYGTDKPDLRNPLVMQ
DVSEHFRGSGFKVFARMLEQSGNEVWAIPGPAGGSRAFCDRMNSWAQGEGQPGLGYIMWR
EGGEGAGPLANNIGPERTAAIRAQLGLKDGDAAFFVAGDPQKFWKFAGAARTKLGEELNL
IDKDRFELAWIVDFPMYEYNEEEKKVDFSHNPFSMPQGGLEALETQDPLTIKAFQYDIAC
NGYEIASGGIRNHKPAAMVKAFEIAGYGEETVVERFGGMYRAFQYGAPPHGGMAAGVDRI
VMLLCGTNNLREISLFPMNQRAEDLLMGAPSEVSTKQLRELHIRLNLPQN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgctaccggtcccatacctgcggcgcgctccgcgagagcgacatcgactccaac
gttcgcctctccggctggtgccaccgcatccgcgaccatggcggtctcctgtttatcgac
ctgcgcgaccattacggcatgacgcaatgcgtcatcgatccggattccaaggcgttcaag
ctcgcggaaaagctgcgctcggagtgggtggtgaagatcgacggcaaggttcgccgccgc
cctgacggtaccgacaatcccgacctgccgaccggcgcggtcgaggtgttcatcgccgac
atcgaggtgctgggcgaggcggccgaactgccgctgccggtgttcggcgatctggaatac
ccggaagaggtccggctgaagtaccgcttcctcgacctgcgccgcgagaagctgcaccag
aacatcatgactcgcggacaaatcattgattccatgcgggcacggatgaagaaggagggc
ttcttcgaattccagaccccgatcctcacggcgtcctcgccggaaggcgcgcgcgacttc
ctggtgccgagccgcatccatgccggcaagttctacgcgctgccgcaggcgccgcagcaa
tacaagcagcttctgatgatgtcgggcttcgaccgctacttccagatagcgccgtgcttc
cgcgacgaggacccgcgcgccgaccggttgccgggcgaattctatcagctcgacctcgag
atgagcttcgtgacgcaagacgatgtttttgctgcgatggagccggtcatcaccggggtg
ttcgaggatttcgcgaacggcaagccggtgacgaagaactggccgcgcattccgttcgcc
gagagcttgcgcaaatacggcaccgacaagccggacctgcgcaatccgctggtgatgcag
gacgtctccgagcatttccgaggctcgggcttcaaggtgttcgcgcggatgcttgaacag
tccggcaacgaggtctgggcgattccgggtcccgcaggtggttcgcgcgcgttctgcgat
cgcatgaactcgtgggcgcagggcgagggccagccggggctcggctacatcatgtggcgc
gaaggcggagaaggcgcaggcccgctcgccaacaacatcggaccggagcgcaccgccgcg
atccgcgcgcaactcggcctcaaggacggcgacgccgcgttcttcgtcgcgggggatccg
cagaagttctggaagttcgccggtgcggcgcgcacgaaactcggcgaggaactgaacctg
atcgacaaggaccggttcgagctcgcctggatcgtcgatttcccgatgtacgaatacaac
gaggaagaaaagaaggtcgatttctcccacaatccgttctcgatgccgcagggcggcctc
gaagcattggagacgcaggacccgctcaccatcaaggcgttccagtacgacatcgcctgc
aacggctacgagatcgcctcgggtggtatccgcaaccacaagccggccgcgatggtaaag
gcgttcgagatcgccggttacggcgaggagaccgtggtcgagcgtttcggcggcatgtat
cgcgccttccagtacggcgcgccgccccatggcggcatggcggcgggcgtcgatcgcatc
gtcatgctgctttgcggtaccaacaacctgcgcgaaatctcgctgttcccgatgaaccag
cgcgccgaggatctgttgatgggcgcgccgtcggaggtatcgaccaagcagttgcgcgaa
ctgcacatcaggctcaacctgccacaaaactga
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