Pseudomonas carboxydohydrogena: AFIC_001922
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Entry
AFIC_001922 CDS
T08963
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pcax
Pseudomonas carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcax03400
]
AFIC_001922 (radA)
DNA repair and recombination proteins [BR:
pcax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AFIC_001922 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
AAA_16
AAA_22
DnaB_C
Lon_C
AAA_24
AAA_30
AAA
RecA
SLFN-g3_helicase
MeaB
MCM
NACHT
NPHP3_N
NTPase_1
nSTAND3
ADK_lid
ATPase_2
GvpD_bR2
ABC_tran
AAA_19
AAA_14
AAA_29
AAA_5
Motif
Other DBs
NCBI-ProteinID:
WEF50385
LinkDB
All DBs
Position
1993189..1994601
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AA seq
470 aa
AA seq
DB search
MAKHAPSFVCQNCGSAYNKWQGKCEGCGEWNTLSEEDSIAAAAMPASIRPKRKGRLFTLE
SLTGESQQAPRLPSGMAELDRVTGGGFVRGSVLLVGGDPGIGKSTLLTQATSLLARAGHR
AVYISGEEAVAQVRLRAARLGLADAAVQLAAETSVEDIIATLSEGAPPRLVVIDSIQTMW
TDTVESAPGTVTQVRASAQALIRFAKKSGAALILVGHVTKDGQIAGPRVVEHMVDAVLSF
EGEGSQQFRILRSVKNRFGPTDEIGVFEMTGLGLREVTNPSELFLSERDLGSPGTAVFAG
IEGTRPVLVELQALVAPTSLGTPRRAVVGWDPSRLSMVLAVLEAHCGIKLSGHDVYLNVA
GGLRIQEPAADLAAAAALVSSLANAPLPVDAVYFGEISLSGAVRPVAQASARLKEAAKLG
FARAVLPETARGDAGAGDVGLSLNTVNSLTSLVADIAARSEKRLRPAAQG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacatgccccttccttcgtctgccagaactgcggctccgcctacaacaagtgg
cagggcaagtgcgaaggctgcggcgagtggaacacgctgtccgaggaagactcgatcgcg
gcggccgcgatgcccgccagcatccggcccaagcgcaaaggccgcctgttcacgctggaa
tccctgaccggcgaatcccagcaggccccgcgtctgccgtccggcatggccgagctcgac
cgcgtcaccggcggcggcttcgtgcgcggctcggtgcttctggtcggcggcgaccccggc
atcggcaaatcgacgctgctgacacaggccaccagccttctcgcccgcgcgggccatcgc
gctgtctacatctcgggcgaggaagccgtggcgcaagtgcggttgcgcgccgcgcgcctc
ggtctggcggatgcggcggttcaactcgccgccgagacttcggttgaagacatcatcgca
accctttcggaaggcgcgcctccccggctcgtcgtcatcgattccatccagacgatgtgg
accgacacggtggaatccgcccccggcacggtgacgcaggttcgcgcctcggcgcaggcg
ctcattcgcttcgccaagaagtccggcgcggcgctcatcctcgtcggccacgtcaccaag
gacggccagatcgcgggcccccgcgtcgtcgaacacatggtcgatgccgtgctgtcgttc
gagggcgaaggctcccagcagttccgcatcctgcgctcggtcaagaaccgtttcgggccg
accgacgagatcggcgtgttcgagatgaccgggcttggcctgcgcgaggtcaccaaccct
tccgaactgttcctgtccgagcgcgatctcggcagtccgggcacggcggtgttcgcgggc
atcgaaggcacgcgcccggtgttggtggaattgcaggcgctggtcgcacccacctcgctc
ggcacgccccgccgcgccgtggtcggctgggacccaagccgcctgtcgatggtgctggcg
gtgctggaggcccattgcggcatcaagctctcgggccatgacgtctatctcaatgtcgcg
ggcggcctgcgcattcaggaacccgcagcagaccttgccgccgctgccgccctcgtctca
tctctcgccaacgcgccgctgccggtcgatgccgtctatttcggcgaaatctcgctgtcg
ggcgcggtgcgccctgtcgcgcaagcctccgcccggctgaaggaggccgccaagctcggc
ttcgcccgtgcggtgttgccggagaccgcgcgcggagatgcaggcgcgggcgatgtcgga
ttgagtctcaacaccgtgaattccctgacctcgctggtcgcggacatcgcagcaagaagc
gagaagcgcttgcgtcccgccgcgcagggatag
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