Afipia carboxydohydrogena: AFIC_001927
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Entry
AFIC_001927 CDS
T08963
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pcax
Afipia carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcax03009
]
AFIC_001927 (der)
Ribosome biogenesis [BR:
pcax03009
]
Prokaryotic type
GTPases
AFIC_001927 (der)
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Arf
Roc
Ras
ABC_tran
AAA_24
AAA_18
Septin
SRPRB
TniB
URGCP_GTPase
HflX_C
Motif
Other DBs
NCBI-ProteinID:
WEF50390
UniProt:
A0ABY8BK86
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All DBs
Position
complement(1998532..1999908)
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AA seq
458 aa
AA seq
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MSFTIAIIGRPNVGKSTLFNRLVGQKLALVDDQPGVTRDRREGLGRLGDLEFTIIDTAGL
DSGPRGSLTARMQEQTETAIAAADALMFVIDARAGLTPNDRAFADFARRANKPALLLANK
SEGKQGEAGIAESYALGLGDPIGISAEHGEGMGDLYDALRELMPEPIEDEDEGDADEDNA
DDPTRPIRVAVLGRPNAGKSTLINHLLGEERLLTSPEAGTTRDSIAVDVEWKGRRLRVFD
TAGLRRRSRIDDKLEKLSVSDALRAVRFAEVVVLVMDAQNRFEEQDLRLADLVEREGRAL
VLAVNKWDLVERAPSAIGKLRETADHLLPQVRGAPVVAISGLMGEGIDRLIGAIEKAYAT
WNKRIPTSALNRWFEQATRNNPPPAVSGRRLKLNYVTQTKARPPSFVVFCSRADAVPQSY
LRYLTNTLREAFDLPGTPVRITLREKANPFAHKAKRKS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaccattgcgatcatcggccgccccaacgtcggcaaatcgacgctgttcaat
cggctggtcggacaaaaactcgcgctggtggacgaccagcccggtgtgacgcgtgatcga
cgtgaagggctgggccgtctcggagatctcgaattcaccatcattgatacggccggtctc
gattcaggcccgcgcggctcgctcaccgcgcggatgcaggagcagaccgagacggccatc
gccgccgccgatgcgctgatgttcgtgatcgatgcgcgcgcgggccttacgccgaacgac
cgcgccttcgccgacttcgcgcgccgcgccaacaagccggcgctgctgctcgccaacaag
agcgagggcaagcagggcgaggctggtatcgccgaatcctatgcgctcggcctcggcgat
ccgatcgggatttccgcagagcatggcgagggcatgggcgatctgtacgacgcgctgcgc
gaattgatgcccgagcccatcgaggacgaggatgaaggcgacgcagatgaggacaacgcg
gacgatcccacgcggccgatccgtgtcgcggtgctcggccgccccaatgcgggcaaatcg
acgctgattaatcatctgctcggcgaggaacggctgctgacgagcccggaagcgggcacc
acgcgcgattccatcgcggtggatgtggaatggaagggccgcaggctgcgggtgttcgac
accgcggggcttcgccgccgctcgcgcatcgacgacaaactcgagaagctgtcggtgtcg
gacgcgctgcgcgcggtgcggttcgccgaagtcgtggtgctggtgatggatgcgcagaac
cgcttcgaggagcaggatctgcgtctggccgatcttgtcgagcgggaaggccgcgcgctc
gtgctcgccgtcaacaaatgggatctggtggagcgcgcgccgagtgcgatcggcaagctg
cgcgaaaccgccgatcatcttttgccgcaggtgcgcggcgcgcccgtggtggcgatctcg
ggcctgatgggcgagggcatcgaccggctgatcggcgcgatcgagaaggcctatgccacc
tggaacaagcgcatcccgaccagcgcgctgaaccgctggttcgagcaggcgacgcgcaac
aatccgccgcccgccgtgtcgggccgccgcctcaaactgaattacgtgacacagaccaag
gcacggccgccgagcttcgtggtgttctgctcgcgcgccgacgcggtgccgcaatcctat
ctgcgctatctcaccaacaccctgcgcgaggcgttcgatctacccggcacgccggtgcgc
atcacgctgcgcgagaaggccaatccgttcgcgcacaaggcgaagcggaagtcctag
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