Afipia carboxydohydrogena: AFIC_001961
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Entry
AFIC_001961 CDS
T08963
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
pcax
Afipia carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcax03000
]
AFIC_001961
Transcription factors [BR:
pcax03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
AFIC_001961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
TetR_C_13
ACDH-11_C
ARM_ECM29_C
DUF7832
DUF6262
Motif
Other DBs
NCBI-ProteinID:
WEF50423
UniProt:
A0ABY8BK97
LinkDB
All DBs
Position
complement(2030989..2031618)
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AA seq
209 aa
AA seq
DB search
MRYARNHKAATRERILQGAVTRLKENGSGGIAIAELMEDAGLTHGGFYAHFKSRDALVEE
SFRHALEGIAQRWRARAEKAPRGEGLEAIVNGYLTREHRDDASGGCALPAIGAELARSSA
RTRRIFTERLEDAIDAVAAQSAESPAKVAREEAIGVIATMVGSLLLARAAGHEQLSADIL
KAGRKKALAEHRPRARRAIAKPVRTKVPR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacgcccggaatcacaaagcggcgacccgcgagaggatcctgcaaggggcggtc
acgcgcctgaaggaaaatgggtccggcggcatcgccatcgcggagttgatggaggatgcg
ggcctcacccatggcggcttctatgcgcatttcaaatcgcgcgatgcgctggtcgaggaa
tcgttccgtcatgcgctggaggggatcgcgcagcgctggcgggcgcgggccgagaaggcg
ccgcgaggcgaggggctggaggccatcgtgaacggctatctgacgcgcgagcatcgcgac
gacgcatcgggcggttgcgcgttaccggcaatcggtgctgagttggcccgctccagcgca
aggacgcggcgcattttcaccgaaaggctggaggatgcgatcgatgccgtcgccgcgcaa
agcgcggaaagtccggcgaaggtcgcgcgcgaagaggcgatcggcgtcatcgcgaccatg
gtgggaagccttttgctggcgcgcgccgccggtcacgaacaattatcggcggacattctg
aaggccgggcggaagaaagcgctcgcggaacacagaccgcgcgcccggcgcgccattgcg
aaaccggtgcggacaaaggtgcctcgatag
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