Pseudomonas carboxydohydrogena: AFIC_001964
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Entry
AFIC_001964 CDS
T08963
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AFIC_001964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_001964
Transporters [BR:
pcax02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AFIC_001964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Man-6-P_recep
UBA_RAD5A
Motif
Other DBs
NCBI-ProteinID:
WEF50426
LinkDB
All DBs
Position
complement(2034466..2037615)
Genome browser
AA seq
1049 aa
AA seq
DB search
MSYGGVSAPFIRYPIATSLLMVGVLFVGLVAYPSLPIAPLPQVDFPTIQVSASLPGASPE
TMASSVAQPLERQFAQIPGVAQLTSTSSLGSTSVTIQFDLNRAIDGAANDVQAAINAAGG
QLPKNLPSPPTYRKVNPADAPIMILSATSDTMPLIDVNDAIDSQLAQQLSQITGVAQVTI
GGQQKPAIRVQIDPAKLVAKGLGLEDVRAQLVQTTVDSPKGNIDGKTRSYTIYANDQLPA
SKDWNDVIIAYRNGGPLRIRDIGQAVSGPEDMKQAAWANNKRGVFLVVFKQPGANVIETV
DKIKAQLPRLEKAIPPAVKVTIMSDRTTTIRAAVEDVQFTLLLTIALVVMVIFIFLRSFW
ATVIPSITVPLALLGACALMWVAGYTLDNLSLMALTIAVGFVVDDAIVMLENISRYVEKG
EDPYRAALKGASEIGFTIVSISVSLVAVLIPLLLMGGIIGRLFREFAVTLAMTIFVSMIV
SLTLTPMMASRFLQPHREHQQHGRFYQWSERMFDGMLYWYERGLNVVMRWRFTTLMVFFA
TLALSVILFIAIPKGFFPQQDNGLLTGASQAAQDISFADMKRKQEELGKIVMEDPDVFSV
AMAIGGGGSALNTGRLYITLKPRNERTALAPQIIARIRAKAEKVEGAKLYLQASQDVRLG
GRATRTQFEYTLQDANLAELNEWAPKILAKMETLPQLRDVATDQQTKGTTLTLTIDRDTA
SRYGISPQLIDDTLYDAFGQRQVAQYFTQLNSYHVVMEILPEMQGDLDSLQKIYIKSPTT
GDQVPLSTFVRWTTDPVRPLSISHQGQFPAITISFNLAQGVALGQATDAVQKAVADLGVP
GTLSGSFQGTAQAFQQSLGTIPLLIFAALIVVYLILGILYESYIHPITILSTLPSAGVGA
LATLMIFGYDFSLIALIGIVLLIGIVKKNGIMLVDFAIAAERDEHLTSEEAIHKAALLRF
RPIMMTTMAALLGGVPLMLGHGTGSEIRQPLGFAMVGGLLVSQVLTLFTTPVIYLYLDRL
SNWMSQFGRGTPSDSDHSEPPSAVSEAAE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggcggcgtttcggctcccttcatccgctaccccatcgcaacctcgttgctg
atggtgggcgtgctgttcgtcggcctcgtggcgtacccgtcgctgccgatcgcgccgctg
ccgcaggtggattttccgaccattcaggtctcggcgagcttgccgggcgcgagtcccgaa
acgatggcgtcgtcggtcgcccagcctctggagcggcagttcgcgcagatccctggcgtc
gcgcaattgacctcgacgagttcgctcggctcgacgtccgtgacgatccagttcgatctc
aaccgcgccatcgacggtgcggccaatgacgtgcaggcggcgatcaatgccgccggcggc
cagttgccgaaaaacctgccgagcccgccgacctatcgcaaggtcaatccggcggatgcg
ccgatcatgatcctgtcggcgacctccgacaccatgccgctgatcgatgtcaatgacgcg
atcgacagccagttggcccagcagctcagccagatcaccggcgtcgcccaggtcaccatc
ggcggtcagcagaagcccgcgatccgcgtgcagatcgaccccgccaagctggtggcgaag
ggactcggtctggaagacgtgcgcgcccagctggtgcagaccacggtcgatagcccgaag
ggcaatatcgacggcaagacccgcagctacacgatctacgccaacgaccagttgccggcg
tcgaaggactggaacgacgtcatcatcgcctatcgcaatggcggtccgttgcgcatccgc
gacatcgggcaggcggtgtcgggccccgaggacatgaagcaggcggcgtgggcgaacaac
aagcgcggcgtgttccttgtcgtcttcaaacagcccggcgccaacgtcatcgagacggtc
gacaagatcaaggcgcagttgccgcggctggagaaagccattccgcccgcggtcaaggtc
acgatcatgagcgaccgcaccacgaccatccgtgcggcggtcgaggacgtgcagttcacg
ctgcttctcaccatcgccctcgtggtcatggtgatcttcattttcctgcgcagcttctgg
gcgacggtgattccgagcatcactgtgccgctggcgctgctcggcgcctgcgcgctgatg
tgggtggcgggctacacgctcgacaatctgtccctgatggcgctcaccatcgcggtcggt
ttcgtggtcgacgacgccatcgtgatgctggagaacatttcgcgatacgtggagaagggg
gaggacccataccgggccgcgttgaagggcgcgagcgagatcggcttcaccatcgtgtcg
atcagcgtgtcgctggtcgcggtgctgattccgctgctgctgatgggcggcatcatcggg
cgcctgttccgcgaattcgcggtgacgctggcgatgacgatcttcgtctccatgatcgtg
tcgctgacgctgacgccgatgatggcctcacgctttctgcaaccgcaccgggagcaccag
cagcacggcaggttctaccagtggagcgagcgcatgttcgacggcatgctctattggtac
gagcgtggcctgaacgtggtgatgcgctggcgcttcaccaccctgatggtgttcttcgcg
acgctggcattgtccgtgatccttttcatcgcgatcccgaagggcttcttcccgcaacag
gacaacggcctgctgaccggcgcatcgcaggcggcgcaggatatttccttcgccgacatg
aagcgcaaacaggaagaactcggcaagatcgtgatggaggaccccgacgttttcagcgtc
gcgatggcgatcggcggcggcggcagcgcgctgaacaccggccgtctttacatcacactg
aagccgcgcaacgagcgcacggcgctggcgccccagatcatcgcgcggattcgcgccaag
gccgagaaggtggaaggcgcgaaactctatctgcaagcgtcgcaggacgtgcgcctcggc
ggccgagccacccgcacgcagtttgaatacaccttgcaggatgccaaccttgccgaactg
aacgagtgggcgccgaagattctggcgaagatggagacgttgccgcaactgcgcgacgtc
gcgaccgaccagcagaccaagggcaccacgctgacgctgaccatcgaccgcgatacggcg
tcgcgttacggcatctcgccgcaactgatcgacgatacgctgtacgatgccttcggccag
cgtcaggtcgcgcagtatttcacccagctcaacagctatcacgtggtgatggagattttg
cccgagatgcagggcgatctggacagcctccagaaaatctacatcaagtcaccgacgacg
ggcgatcaggtgccgctctcgaccttcgtgcgctggacaaccgatccggtgcggccgctg
tcgatcagccatcagggccaattcccggcgatcaccatcagcttcaatctcgcgcagggc
gtagcactcgggcaggcgacagacgccgtgcagaaggcggtggccgatcttggcgtgccg
ggcacgttgagcggcagtttccagggcaccgcgcaggcgttccagcaatcgctcggcacc
attccgctcctgatcttcgccgcgctcatcgtggtgtacctgatcctcggcattctctat
gaaagctacatccacccgatcaccattctgtccacgctgccatcggccggcgtcggcgcg
ctcgcgacgctgatgatcttcggctacgacttcagcctgatcgcgctgatcggcatcgtg
cttctgatcggcatcgtgaagaagaacggcatcatgctggtggacttcgcgatcgcggct
gagcgcgacgagcatctgacctcggaggaggccatccacaaggcggcgctgctgcgcttc
cgcccgatcatgatgacgacgatggcggcgctgctcggcggcgtgccgctgatgctcggc
cacggtacgggttcggaaatccgccagccgctcggcttcgccatggtcggcggcctgctt
gtcagccaggtgctgacattgttcaccacgccggtgatctatctctacctcgaccgcctg
tcgaactggatgtcgcagttcggacgcggcacgccgtccgatagcgatcattccgagccg
ccgagcgcggtgtcggaggcggcggagtag
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