Pseudomonas carboxydohydrogena: AFIC_002012
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Entry
AFIC_002012 CDS
T08963
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AFIC_002012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_002012
Transporters [BR:
pcax02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AFIC_002012
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WEF50471
LinkDB
All DBs
Position
complement(2085640..2086728)
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AA seq
362 aa
AA seq
DB search
MKRRDFLKVSAAGAAGASIASPAIAQSMPVIKWRMTSSFPKSLDTLFGAGVMMAKQVAEM
TDNKFQIEVFAAGELVPGLQALDAAANGTVEMSHSVAYYYVGKDPTFAIYSCVPFGLNAR
MQNSWWYQGGGEQLGNAFFQKYGVIAHPCGNTNTQMGGWFRKEIKTLADLRGLKMRIGGI
AGQVMAKLGVVPQQLAGSDIYPALEKGTIDAAEWVGPYDDEKLGFQKVAPFYYYPGFWEG
GPMIHVFTNLAKWNSLPKNYQAIVANAMANANIYMAARYDEQNPAALKRLVASGTMLRPF
NKDILEEALKATNELWADLSAKNPSFKQSIDAMQAYRNDEYLWWQVAELTFDSFQIRSRS
RG
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcgcgattttctgaaagtgtcggcagcgggtgccgcaggcgcatccattgca
tccccggccatcgcgcagtcgatgcccgtcatcaagtggcggatgacgtcgagcttcccg
aaatcgctcgatacgcttttcggcgcgggcgtgatgatggcgaagcaggtcgccgaaatg
accgacaacaaattccagatcgaggtgttcgccgcgggcgaactcgttcccggtttgcag
gcactcgacgcggccgcgaacggcaccgtcgagatgagccacagcgtggcttactactat
gtcggcaaggacccgaccttcgcgatctattcctgcgtgccgttcgggctgaacgcgcgg
atgcagaattcatggtggtaccagggcggcggcgaacagctcggcaacgccttcttccag
aagtatggcgtgatcgcgcatccgtgcggcaacaccaacacccagatgggtggctggttt
cgcaaggagatcaagacgctcgccgatctgcgcggcctgaagatgcgcatcggcggcatc
gccgggcaggtgatggcgaagctcggcgtcgtgccgcagcaactcgcgggcagcgacatc
tatccggcgctggaaaagggcaccatcgacgcggccgaatgggttgggccttacgacgac
gaaaagctcggattccagaaggtcgcgccgttctattattatcccggcttctgggaaggc
ggcccgatgatccatgtcttcaccaatctggcgaagtggaattcgctgccgaaaaactat
caggcgatcgtcgccaatgcgatggcgaacgccaacatctatatggcggcgcgttatgac
gagcagaatccggcggccttgaagcgccttgtcgcgagcggcacgatgctgcgtcccttt
aacaaggacattctggaagaggcgctcaaggcgacgaacgaattgtgggcggacctgtcc
gccaagaatccgagcttcaagcagtcgatcgatgcgatgcaggcctatcgcaacgatgag
tatctgtggtggcaggtcgccgaactgacgttcgatagtttccagatacgctctcgaagc
cgcggctga
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