Afipia carboxydohydrogena: AFIC_002030
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Entry
AFIC_002030 CDS
T08963
Name
(GenBank) amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax02010
ABC transporters
pcax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AFIC_002030
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFIC_002030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_002030
Transporters [BR:
pcax02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
AFIC_002030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
WEF50488
LinkDB
All DBs
Position
complement(2101575..2102792)
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AA seq
405 aa
AA seq
DB search
MSNGLISKKTLIAAASAAVLALAANPAVAKDIVFGASVQLTGPVANTGRYYRDAYELAIE
KINAAGGVKVGNEKRKVVLKIYDNQSDVNLSVRQYTQLVSQDKVDFLLGPFASNFALADS
AVSEKYKIPMVQGGGASDQIFARKFKYIFGTLAPASNYFGSTIEMMKGLKPAPKSVALLY
ADDSFDVSVGDGTRPKLKAAGFDIVMDERYSTNATDFNSLLSQIRSKNVDAVLVAGHETE
ILNFVRQAKSLTVAPKMYSFTVGVPSEDFRKALGKDADYAFGMTAWLPSADLKDRWFGDA
SKFEAEYKAKFNYEPDYHAASGAADVEALAQAIEDAGSTDPAKVRDALAKVKFESIYGPI
AFAENGQIDLPQTVIQVQGDKLVAIHGTKGAINPAKYPMPAWNAR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggattgatctccaaaaagaccttgattgcggcggcttctgctgccgtgctg
gcgcttgccgccaatccggcggttgcaaaggatattgttttcggtgcgtctgtgcagttg
accggtccggtcgccaacacgggccgctactatcgcgatgcctatgagcttgcgatcgag
aagatcaatgcagccggcggcgtgaaggtcggcaacgagaagcgcaaggtcgtcctcaag
atttatgacaaccagtccgatgtgaatttgagcgtgcggcagtacacccagctcgtttcg
caggacaaggttgatttcctgctcgggccgttcgccagcaacttcgcgctggcagactcc
gccgtgtcggaaaagtacaagattccgatggtgcagggcggcggcgcttcggaccagatc
ttcgcccgcaagttcaagtacatcttcggcacgctggcgcccgccagcaactatttcggc
tccaccatcgagatgatgaagggtctgaagcctgcgccgaagtcggtggcgctgttgtac
gccgacgactccttcgacgtgtcggtgggtgacggcacccggccgaagctgaaggcggcg
ggcttcgatatcgtgatggacgagcgctacagcaccaacgcgaccgacttcaactcgctg
ctgtcgcagatccgcagcaagaacgtcgatgcggtgctggtcgcgggtcacgagaccgag
attctcaacttcgtccgccaggccaagagcctgacggttgcgccgaagatgtattcgttc
accgtcggcgtgccgagcgaggatttccgcaaggcgctcggcaaggatgccgactatgct
ttcggcatgacggcctggctgccttcggccgatctgaaggaccgctggttcggcgacgcg
tcgaagttcgaggccgaatacaaggccaagttcaactatgagccggactatcacgccgct
tccggcgccgccgatgtcgaggcgctggctcaggcgatcgaggatgccggttcgaccgat
cccgccaaggttcgcgatgcgctcgccaaggtgaagttcgagagcatctacggcccgatc
gcgttcgcggagaacggccagatcgatctgccgcagaccgtgatccaggtgcagggcgac
aagctcgtcgcgatccatggcaccaagggcgcgatcaacccggcgaagtacccgatgccg
gcctggaatgcgcgctaa
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